Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CENPAP49450 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPAP49450 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPAP49450 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.87■□□□□ 0.45
CENPAP49450 AC026271.2-201ENST00000428091 497 ntBASIC17.87■□□□□ 0.45
CENPAP49450 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.87■□□□□ 0.45
CENPAP49450 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPAP49450 AC008694.1-202ENST00000636953 945 ntBASIC17.87■□□□□ 0.45
CENPAP49450 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.87■□□□□ 0.45
CENPAP49450 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPAP49450 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.87■□□□□ 0.45
CENPAP49450 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CENPAP49450 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CENPAP49450 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CENPAP49450 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.86■□□□□ 0.45
CENPAP49450 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.86■□□□□ 0.45
CENPAP49450 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.86■□□□□ 0.45
CENPAP49450 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.86■□□□□ 0.45
CENPAP49450 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CENPAP49450 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.86■□□□□ 0.45
CENPAP49450 MIR5787-201ENST00000611784 55 ntBASIC17.86■□□□□ 0.45
CENPAP49450 BID-214ENST00000617586 542 ntTSL 5 BASIC17.86■□□□□ 0.45
CENPAP49450 AC100791.3-201ENST00000617619 330 ntBASIC17.86■□□□□ 0.45
CENPAP49450 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.86■□□□□ 0.45
CENPAP49450 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CENPAP49450 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
CENPAP49450 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.86■□□□□ 0.45
CENPAP49450 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CENPAP49450 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CENPAP49450 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.86■□□□□ 0.45
CENPAP49450 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.86■□□□□ 0.45
CENPAP49450 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.85■□□□□ 0.45
CENPAP49450 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CENPAP49450 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPAP49450 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPAP49450 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CENPAP49450 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.85■□□□□ 0.45
CENPAP49450 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CENPAP49450 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPAP49450 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.85■□□□□ 0.45
CENPAP49450 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.85■□□□□ 0.45
CENPAP49450 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CENPAP49450 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.85■□□□□ 0.45
CENPAP49450 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.85■□□□□ 0.45
CENPAP49450 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.85■□□□□ 0.45
CENPAP49450 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CENPAP49450 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.85■□□□□ 0.45
CENPAP49450 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.85■□□□□ 0.45
CENPAP49450 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CENPAP49450 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CENPAP49450 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CENPAP49450 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPAP49450 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPAP49450 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CENPAP49450 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CENPAP49450 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.84■□□□□ 0.45
CENPAP49450 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPAP49450 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPAP49450 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPAP49450 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPAP49450 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CENPAP49450 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.84■□□□□ 0.45
CENPAP49450 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPAP49450 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
CENPAP49450 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.84■□□□□ 0.45
CENPAP49450 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CENPAP49450 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CENPAP49450 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPAP49450 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPAP49450 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.84■□□□□ 0.45
CENPAP49450 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CENPAP49450 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CENPAP49450 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CENPAP49450 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CENPAP49450 MCRIP2P1-201ENST00000394346 511 ntBASIC17.84■□□□□ 0.45
CENPAP49450 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPAP49450 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CENPAP49450 RARRES2P4-201ENST00000514074 484 ntBASIC17.84■□□□□ 0.45
CENPAP49450 DUX4L16-201ENST00000555130 1264 ntBASIC17.84■□□□□ 0.45
CENPAP49450 AC069236.1-201ENST00000604339 616 ntBASIC17.84■□□□□ 0.45
CENPAP49450 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CENPAP49450 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPAP49450 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CENPAP49450 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms