Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSKP43235 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSKP43235 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTSKP43235 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTSKP43235 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTSKP43235 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTSKP43235 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.67■□□□□ 0.74
CTSKP43235 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTSKP43235 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CTSKP43235 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTSKP43235 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTSKP43235 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTSKP43235 TMPOP1-202ENST00000424642 1267 ntBASIC19.67■□□□□ 0.74
CTSKP43235 RBM17P1-201ENST00000453646 1190 ntBASIC19.67■□□□□ 0.74
CTSKP43235 AP002982.1-201ENST00000492365 877 ntBASIC19.67■□□□□ 0.74
CTSKP43235 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.67■□□□□ 0.74
CTSKP43235 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.67■□□□□ 0.74
CTSKP43235 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CTSKP43235 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CTSKP43235 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.67■□□□□ 0.74
CTSKP43235 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTSKP43235 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTSKP43235 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTSKP43235 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.67■□□□□ 0.74
CTSKP43235 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTSKP43235 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTSKP43235 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CTSKP43235 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.67■□□□□ 0.74
CTSKP43235 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTSKP43235 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTSKP43235 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.66■□□□□ 0.74
CTSKP43235 HLA-G-202ENST00000376815 851 ntBASIC19.66■□□□□ 0.74
CTSKP43235 HLA-G-203ENST00000376818 1127 ntBASIC19.66■□□□□ 0.74
CTSKP43235 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.66■□□□□ 0.74
CTSKP43235 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.66■□□□□ 0.74
CTSKP43235 RN7SL850P-201ENST00000579959 291 ntBASIC19.66■□□□□ 0.74
CTSKP43235 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.66■□□□□ 0.74
CTSKP43235 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.66■□□□□ 0.74
CTSKP43235 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTSKP43235 LINC01521-201ENST00000504184 1943 ntBASIC19.66■□□□□ 0.74
CTSKP43235 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTSKP43235 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CTSKP43235 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTSKP43235 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CTSKP43235 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CTSKP43235 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CTSKP43235 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CTSKP43235 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSKP43235 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSKP43235 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSKP43235 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CTSKP43235 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.65■□□□□ 0.74
CTSKP43235 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSKP43235 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSKP43235 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.65■□□□□ 0.74
CTSKP43235 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.65■□□□□ 0.74
CTSKP43235 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.65■□□□□ 0.74
CTSKP43235 AC145285.6-201ENST00000604632 637 ntBASIC19.65■□□□□ 0.74
CTSKP43235 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CTSKP43235 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.65■□□□□ 0.74
CTSKP43235 REXO1L10P-201ENST00000615707 1290 ntBASIC19.65■□□□□ 0.74
CTSKP43235 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTSKP43235 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSKP43235 AC079598.2-202ENST00000546624 1451 ntBASIC19.65■□□□□ 0.74
CTSKP43235 PTBP1P-201ENST00000554374 1601 ntBASIC19.65■□□□□ 0.74
CTSKP43235 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSKP43235 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.65■□□□□ 0.74
CTSKP43235 AC121338.2-201ENST00000622535 1744 ntBASIC19.65■□□□□ 0.74
CTSKP43235 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CTSKP43235 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.64■□□□□ 0.74
CTSKP43235 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.64■□□□□ 0.74
CTSKP43235 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CTSKP43235 AL157384.1-201ENST00000445995 2473 ntBASIC19.64■□□□□ 0.74
CTSKP43235 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSKP43235 MIR6786-201ENST00000616843 113 ntBASIC19.64■□□□□ 0.73
CTSKP43235 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.64■□□□□ 0.73
CTSKP43235 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSKP43235 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSKP43235 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTSKP43235 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSKP43235 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSKP43235 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CTSKP43235 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CTSKP43235 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSKP43235 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSKP43235 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSKP43235 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSKP43235 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSKP43235 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSKP43235 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.63■□□□□ 0.73
CTSKP43235 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSKP43235 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSKP43235 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTSKP43235 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CTSKP43235 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.63■□□□□ 0.73
CTSKP43235 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSKP43235 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.63■□□□□ 0.73
CTSKP43235 UNC93B2-201ENST00000285383 730 ntBASIC19.63■□□□□ 0.73
CTSKP43235 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
CTSKP43235 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms