Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 CCR12P-201ENST00000446203 998 ntBASIC29.78■■■□□ 2.36
KDM5CP41229 AC008040.2-201ENST00000461049 708 ntBASIC29.78■■■□□ 2.36
KDM5CP41229 AC141257.4-201ENST00000634557 245 ntBASIC29.78■■■□□ 2.36
KDM5CP41229 AC136944.6-201ENST00000634818 245 ntBASIC29.78■■■□□ 2.36
KDM5CP41229 AC116562.4-202ENST00000641738 218 ntBASIC29.78■■■□□ 2.36
KDM5CP41229 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC29.78■■■□□ 2.36
KDM5CP41229 AC005332.1-201ENST00000577698 1310 ntBASIC29.78■■■□□ 2.36
KDM5CP41229 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
KDM5CP41229 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC29.78■■■□□ 2.36
KDM5CP41229 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
KDM5CP41229 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
KDM5CP41229 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC29.77■■■□□ 2.36
KDM5CP41229 AL450487.1-201ENST00000426799 995 ntBASIC29.77■■■□□ 2.36
KDM5CP41229 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC29.77■■■□□ 2.36
KDM5CP41229 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
KDM5CP41229 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
KDM5CP41229 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
KDM5CP41229 IER3-202ENST00000376377 1350 ntBASIC29.77■■■□□ 2.36
KDM5CP41229 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
KDM5CP41229 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
KDM5CP41229 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC29.77■■■□□ 2.36
KDM5CP41229 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC29.77■■■□□ 2.36
KDM5CP41229 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC29.77■■■□□ 2.36
KDM5CP41229 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC29.77■■■□□ 2.36
KDM5CP41229 AC083849.1-201ENST00000615227 514 ntBASIC29.77■■■□□ 2.36
KDM5CP41229 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC29.77■■■□□ 2.36
KDM5CP41229 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.36
KDM5CP41229 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC29.76■■■□□ 2.36
KDM5CP41229 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC29.76■■■□□ 2.36
KDM5CP41229 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
KDM5CP41229 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
KDM5CP41229 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
KDM5CP41229 AC244015.2-201ENST00000616358 1861 ntBASIC29.76■■■□□ 2.35
KDM5CP41229 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
KDM5CP41229 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
KDM5CP41229 AC092647.4-201ENST00000457211 535 ntBASIC29.76■■■□□ 2.35
KDM5CP41229 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC29.76■■■□□ 2.35
KDM5CP41229 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC29.76■■■□□ 2.35
KDM5CP41229 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC29.76■■■□□ 2.35
KDM5CP41229 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
KDM5CP41229 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
KDM5CP41229 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
KDM5CP41229 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
KDM5CP41229 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC29.76■■■□□ 2.35
KDM5CP41229 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
KDM5CP41229 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
KDM5CP41229 GOLGA6L3-201ENST00000507199 1679 ntBASIC29.75■■■□□ 2.35
KDM5CP41229 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
KDM5CP41229 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
KDM5CP41229 GXYLT1P6-201ENST00000456472 1187 ntBASIC29.75■■■□□ 2.35
KDM5CP41229 Z85996.1-201ENST00000494644 937 ntBASIC29.75■■■□□ 2.35
KDM5CP41229 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC29.75■■■□□ 2.35
KDM5CP41229 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC29.75■■■□□ 2.35
KDM5CP41229 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC29.75■■■□□ 2.35
KDM5CP41229 CYGB-204ENST00000589342 815 ntTSL 3 BASIC29.75■■■□□ 2.35
KDM5CP41229 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC29.75■■■□□ 2.35
KDM5CP41229 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC29.75■■■□□ 2.35
KDM5CP41229 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
KDM5CP41229 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
KDM5CP41229 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
KDM5CP41229 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
KDM5CP41229 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
KDM5CP41229 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
KDM5CP41229 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
KDM5CP41229 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
KDM5CP41229 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC29.74■■■□□ 2.35
KDM5CP41229 AC004951.3-201ENST00000418645 1148 ntBASIC29.74■■■□□ 2.35
KDM5CP41229 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
KDM5CP41229 TUBB8P6-201ENST00000436895 1288 ntBASIC29.74■■■□□ 2.35
KDM5CP41229 AL359075.1-203ENST00000462729 1002 ntBASIC29.74■■■□□ 2.35
KDM5CP41229 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC29.74■■■□□ 2.35
KDM5CP41229 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC29.74■■■□□ 2.35
KDM5CP41229 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC29.74■■■□□ 2.35
KDM5CP41229 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC29.74■■■□□ 2.35
KDM5CP41229 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
KDM5CP41229 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
KDM5CP41229 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
KDM5CP41229 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC29.74■■■□□ 2.35
KDM5CP41229 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
KDM5CP41229 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
KDM5CP41229 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC29.74■■■□□ 2.35
KDM5CP41229 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
KDM5CP41229 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
KDM5CP41229 LINC00565-201ENST00000562710 2331 ntBASIC29.73■■■□□ 2.35
KDM5CP41229 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
KDM5CP41229 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC29.73■■■□□ 2.35
KDM5CP41229 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
KDM5CP41229 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC29.73■■■□□ 2.35
KDM5CP41229 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
KDM5CP41229 AL023803.3-201ENST00000615559 522 ntBASIC29.73■■■□□ 2.35
KDM5CP41229 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
KDM5CP41229 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
KDM5CP41229 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
KDM5CP41229 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
KDM5CP41229 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
KDM5CP41229 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
KDM5CP41229 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
KDM5CP41229 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
KDM5CP41229 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC29.73■■■□□ 2.35
KDM5CP41229 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms