Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN3P26045 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN3P26045 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN3P26045 ID1-201ENST00000376105 1233 ntBASIC20.16■□□□□ 0.82
PTPN3P26045 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN3P26045 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.16■□□□□ 0.82
PTPN3P26045 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.16■□□□□ 0.82
PTPN3P26045 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PTPN3P26045 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.16■□□□□ 0.82
PTPN3P26045 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.16■□□□□ 0.82
PTPN3P26045 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.16■□□□□ 0.82
PTPN3P26045 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN3P26045 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.16■□□□□ 0.82
PTPN3P26045 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.16■□□□□ 0.82
PTPN3P26045 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN3P26045 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
PTPN3P26045 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.16■□□□□ 0.82
PTPN3P26045 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN3P26045 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.16■□□□□ 0.82
PTPN3P26045 AC124283.5-201ENST00000624661 1809 ntBASIC20.16■□□□□ 0.82
PTPN3P26045 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN3P26045 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN3P26045 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN3P26045 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.15■□□□□ 0.82
PTPN3P26045 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.15■□□□□ 0.82
PTPN3P26045 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN3P26045 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN3P26045 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN3P26045 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN3P26045 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN3P26045 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.15■□□□□ 0.82
PTPN3P26045 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN3P26045 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.15■□□□□ 0.82
PTPN3P26045 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN3P26045 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN3P26045 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN3P26045 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN3P26045 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN3P26045 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN3P26045 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN3P26045 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
PTPN3P26045 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PTPN3P26045 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.14■□□□□ 0.82
PTPN3P26045 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PTPN3P26045 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN3P26045 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN3P26045 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN3P26045 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
PTPN3P26045 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.14■□□□□ 0.81
PTPN3P26045 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN3P26045 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN3P26045 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN3P26045 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PTPN3P26045 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PTPN3P26045 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.14■□□□□ 0.81
PTPN3P26045 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.14■□□□□ 0.81
PTPN3P26045 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.14■□□□□ 0.81
PTPN3P26045 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
PTPN3P26045 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN3P26045 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PTPN3P26045 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN3P26045 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN3P26045 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN3P26045 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
PTPN3P26045 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN3P26045 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN3P26045 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.13■□□□□ 0.81
PTPN3P26045 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN3P26045 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.13■□□□□ 0.81
PTPN3P26045 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN3P26045 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.13■□□□□ 0.81
PTPN3P26045 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PTPN3P26045 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN3P26045 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN3P26045 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN3P26045 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN3P26045 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.13■□□□□ 0.81
PTPN3P26045 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN3P26045 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.13■□□□□ 0.81
PTPN3P26045 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.13■□□□□ 0.81
PTPN3P26045 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
PTPN3P26045 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN3P26045 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PTPN3P26045 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN3P26045 TFP1-202ENST00000475455 1573 ntBASIC20.12■□□□□ 0.81
PTPN3P26045 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PTPN3P26045 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN3P26045 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN3P26045 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN3P26045 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN3P26045 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.12■□□□□ 0.81
PTPN3P26045 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PTPN3P26045 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN3P26045 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.12■□□□□ 0.81
PTPN3P26045 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.12■□□□□ 0.81
PTPN3P26045 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN3P26045 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN3P26045 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN3P26045 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.12■□□□□ 0.81
PTPN3P26045 RPS2P52-201ENST00000469610 820 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms