Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.51■■□□□ 1.03
RFX1P22670 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFX1P22670 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFX1P22670 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFX1P22670 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFX1P22670 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.51■■□□□ 1.03
RFX1P22670 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFX1P22670 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.51■■□□□ 1.03
RFX1P22670 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
RFX1P22670 RPPH1-201ENST00000516869 333 ntBASIC21.51■■□□□ 1.03
RFX1P22670 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.51■■□□□ 1.03
RFX1P22670 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.51■■□□□ 1.03
RFX1P22670 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.51■■□□□ 1.03
RFX1P22670 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFX1P22670 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFX1P22670 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFX1P22670 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFX1P22670 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFX1P22670 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
RFX1P22670 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFX1P22670 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFX1P22670 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFX1P22670 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.5■■□□□ 1.03
RFX1P22670 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
RFX1P22670 AC009237.14-201ENST00000609975 1594 ntBASIC21.5■■□□□ 1.03
RFX1P22670 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFX1P22670 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFX1P22670 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFX1P22670 FAM210CP-201ENST00000445714 574 ntBASIC21.5■■□□□ 1.03
RFX1P22670 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.5■■□□□ 1.03
RFX1P22670 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFX1P22670 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFX1P22670 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.5■■□□□ 1.03
RFX1P22670 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.5■■□□□ 1.03
RFX1P22670 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.5■■□□□ 1.03
RFX1P22670 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.5■■□□□ 1.03
RFX1P22670 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFX1P22670 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFX1P22670 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFX1P22670 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.5■■□□□ 1.03
RFX1P22670 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFX1P22670 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFX1P22670 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFX1P22670 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFX1P22670 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFX1P22670 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFX1P22670 SNORA78-201ENST00000459373 127 ntBASIC21.49■■□□□ 1.03
RFX1P22670 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
RFX1P22670 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.49■■□□□ 1.03
RFX1P22670 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.49■■□□□ 1.03
RFX1P22670 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFX1P22670 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.49■■□□□ 1.03
RFX1P22670 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.49■■□□□ 1.03
RFX1P22670 LINC01023-201ENST00000606054 436 ntBASIC21.49■■□□□ 1.03
RFX1P22670 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFX1P22670 KRT17P1-201ENST00000399211 1546 ntBASIC21.49■■□□□ 1.03
RFX1P22670 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.49■■□□□ 1.03
RFX1P22670 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.49■■□□□ 1.03
RFX1P22670 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
RFX1P22670 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFX1P22670 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.48■■□□□ 1.03
RFX1P22670 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFX1P22670 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RFX1P22670 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.48■■□□□ 1.03
RFX1P22670 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.48■■□□□ 1.03
RFX1P22670 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFX1P22670 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFX1P22670 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFX1P22670 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RFX1P22670 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFX1P22670 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.48■■□□□ 1.03
RFX1P22670 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.48■■□□□ 1.03
RFX1P22670 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.48■■□□□ 1.03
RFX1P22670 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFX1P22670 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFX1P22670 REXO1L12P-201ENST00000622156 912 ntBASIC21.48■■□□□ 1.03
RFX1P22670 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFX1P22670 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFX1P22670 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
RFX1P22670 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFX1P22670 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
RFX1P22670 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RFX1P22670 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.48■■□□□ 1.03
RFX1P22670 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.48■■□□□ 1.03
RFX1P22670 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RFX1P22670 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFX1P22670 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.47■■□□□ 1.03
RFX1P22670 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.47■■□□□ 1.03
RFX1P22670 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFX1P22670 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.47■■□□□ 1.03
RFX1P22670 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFX1P22670 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFX1P22670 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFX1P22670 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.47■■□□□ 1.03
RFX1P22670 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.47■■□□□ 1.03
RFX1P22670 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.47■■□□□ 1.03
RFX1P22670 AC010331.1-201ENST00000611423 582 ntBASIC21.47■■□□□ 1.03
RFX1P22670 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RFX1P22670 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RFX1P22670 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms