Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCL3L1P16619 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL3L1P16619 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.32■□□□□ 0.2
CCL3L1P16619 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.32■□□□□ 0.2
CCL3L1P16619 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.32■□□□□ 0.2
CCL3L1P16619 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.32■□□□□ 0.2
CCL3L1P16619 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL3L1P16619 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL3L1P16619 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.32■□□□□ 0.2
CCL3L1P16619 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL3L1P16619 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL3L1P16619 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCL3L1P16619 AFG3L1P-217ENST00000557444 2447 ntBASIC16.31■□□□□ 0.2
CCL3L1P16619 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CCL3L1P16619 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CCL3L1P16619 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 AC018553.1-201ENST00000616682 1458 ntBASIC16.31■□□□□ 0.2
CCL3L1P16619 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.31■□□□□ 0.2
CCL3L1P16619 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL3L1P16619 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCL3L1P16619 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CCL3L1P16619 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CCL3L1P16619 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 POU5F1P3-201ENST00000428824 1078 ntBASIC16.31■□□□□ 0.2
CCL3L1P16619 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.31■□□□□ 0.2
CCL3L1P16619 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CCL3L1P16619 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CCL3L1P16619 AC006058.3-201ENST00000606217 1069 ntBASIC16.31■□□□□ 0.2
CCL3L1P16619 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCL3L1P16619 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCL3L1P16619 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CCL3L1P16619 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCL3L1P16619 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL3L1P16619 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.3■□□□□ 0.2
CCL3L1P16619 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL3L1P16619 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL3L1P16619 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 KRT17P3-201ENST00000420566 1262 ntBASIC16.3■□□□□ 0.2
CCL3L1P16619 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
CCL3L1P16619 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.3■□□□□ 0.2
CCL3L1P16619 AC233263.1-201ENST00000578059 224 ntBASIC16.3■□□□□ 0.2
CCL3L1P16619 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.3■□□□□ 0.2
CCL3L1P16619 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCL3L1P16619 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.3■□□□□ 0.2
CCL3L1P16619 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL3L1P16619 AC116351.2-201ENST00000606540 1585 ntBASIC16.3■□□□□ 0.2
CCL3L1P16619 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL3L1P16619 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL3L1P16619 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL3L1P16619 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL3L1P16619 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL3L1P16619 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCL3L1P16619 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL3L1P16619 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL3L1P16619 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL3L1P16619 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL3L1P16619 FAM201B-201ENST00000458407 597 ntBASIC16.29■□□□□ 0.2
CCL3L1P16619 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL3L1P16619 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL3L1P16619 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL3L1P16619 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL3L1P16619 AC069544.1-201ENST00000609399 999 ntBASIC16.29■□□□□ 0.2
CCL3L1P16619 AL121906.2-201ENST00000621597 723 ntBASIC16.29■□□□□ 0.2
CCL3L1P16619 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCL3L1P16619 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL3L1P16619 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL3L1P16619 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL3L1P16619 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms