Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT3P12035 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.82■□□□□ 0.92
KRT3P12035 AC060766.5-201ENST00000590539 871 ntBASIC20.82■□□□□ 0.92
KRT3P12035 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
KRT3P12035 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT3P12035 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
KRT3P12035 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.82■□□□□ 0.92
KRT3P12035 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT3P12035 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
KRT3P12035 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT3P12035 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT3P12035 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT3P12035 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.82■□□□□ 0.92
KRT3P12035 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.81■□□□□ 0.92
KRT3P12035 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.81■□□□□ 0.92
KRT3P12035 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.81■□□□□ 0.92
KRT3P12035 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.81■□□□□ 0.92
KRT3P12035 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.81■□□□□ 0.92
KRT3P12035 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.81■□□□□ 0.92
KRT3P12035 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.81■□□□□ 0.92
KRT3P12035 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
KRT3P12035 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
KRT3P12035 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.81■□□□□ 0.92
KRT3P12035 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT3P12035 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
KRT3P12035 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
KRT3P12035 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.8■□□□□ 0.92
KRT3P12035 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT3P12035 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT3P12035 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT3P12035 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT3P12035 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT3P12035 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.8■□□□□ 0.92
KRT3P12035 PNMA6B-201ENST00000538162 1200 ntBASIC20.8■□□□□ 0.92
KRT3P12035 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.8■□□□□ 0.92
KRT3P12035 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
KRT3P12035 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
KRT3P12035 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
KRT3P12035 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KRT3P12035 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT3P12035 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.8■□□□□ 0.92
KRT3P12035 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.8■□□□□ 0.92
KRT3P12035 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
KRT3P12035 AL158211.5-201ENST00000623583 2518 ntBASIC20.79■□□□□ 0.92
KRT3P12035 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT3P12035 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT3P12035 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.79■□□□□ 0.92
KRT3P12035 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT3P12035 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT3P12035 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT3P12035 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT3P12035 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT3P12035 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
KRT3P12035 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.79■□□□□ 0.92
KRT3P12035 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.79■□□□□ 0.92
KRT3P12035 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT3P12035 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
KRT3P12035 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT3P12035 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT3P12035 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
KRT3P12035 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.79■□□□□ 0.92
KRT3P12035 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.79■□□□□ 0.92
KRT3P12035 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.79■□□□□ 0.92
KRT3P12035 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT3P12035 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT3P12035 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT3P12035 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT3P12035 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT3P12035 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.78■□□□□ 0.92
KRT3P12035 AC018553.1-201ENST00000616682 1458 ntBASIC20.78■□□□□ 0.92
KRT3P12035 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT3P12035 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT3P12035 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
KRT3P12035 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.78■□□□□ 0.92
KRT3P12035 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.78■□□□□ 0.92
KRT3P12035 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.78■□□□□ 0.92
KRT3P12035 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.78■□□□□ 0.92
KRT3P12035 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
KRT3P12035 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT3P12035 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.78■□□□□ 0.92
KRT3P12035 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT3P12035 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
KRT3P12035 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.78■□□□□ 0.92
KRT3P12035 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms