Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAB40ALP0C0E4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 FAM197Y1-201ENST00000421178 764 ntBASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 FAM210CP-201ENST00000445714 574 ntBASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 FP700111.2-201ENST00000619190 1892 ntBASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB40ALP0C0E4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RAB40ALP0C0E4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RAB40ALP0C0E4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RAB40ALP0C0E4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB40ALP0C0E4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 AC092667.1-201ENST00000434301 2586 ntBASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 AC133561.5-201ENST00000635547 218 ntBASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB40ALP0C0E4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40ALP0C0E4 AF106564.1-201ENST00000607058 2553 ntBASIC18.62■□□□□ 0.57
RAB40ALP0C0E4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40ALP0C0E4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB40ALP0C0E4 KSR1P1-201ENST00000446298 240 ntBASIC18.62■□□□□ 0.57
RAB40ALP0C0E4 AC097493.4-201ENST00000641197 219 ntBASIC18.62■□□□□ 0.57
RAB40ALP0C0E4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB40ALP0C0E4 KRT16P6-202ENST00000425692 1426 ntBASIC18.62■□□□□ 0.57
RAB40ALP0C0E4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
RAB40ALP0C0E4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40ALP0C0E4 AL157384.1-201ENST00000445995 2473 ntBASIC18.62■□□□□ 0.57
RAB40ALP0C0E4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 AC007225.1-201ENST00000566331 1836 ntBASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 DPP3P2-201ENST00000416030 1696 ntBASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 NUDT16P1-203ENST00000513809 620 ntBASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40ALP0C0E4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms