Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.7■■□□□ 1.38
APPP05067 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.7■■□□□ 1.38
APPP05067 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.7■■□□□ 1.38
APPP05067 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.7■■□□□ 1.38
APPP05067 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.7■■□□□ 1.38
APPP05067 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
APPP05067 AL359736.2-201ENST00000621992 437 ntBASIC23.7■■□□□ 1.38
APPP05067 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
APPP05067 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.7■■□□□ 1.38
APPP05067 AL691432.2-201ENST00000607222 2038 ntBASIC23.7■■□□□ 1.38
APPP05067 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
APPP05067 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
APPP05067 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
APPP05067 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
APPP05067 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
APPP05067 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
APPP05067 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.69■■□□□ 1.38
APPP05067 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
APPP05067 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.69■■□□□ 1.38
APPP05067 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
APPP05067 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
APPP05067 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.69■■□□□ 1.38
APPP05067 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
APPP05067 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.69■■□□□ 1.38
APPP05067 AC239809.2-201ENST00000415381 517 ntBASIC23.69■■□□□ 1.38
APPP05067 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.69■■□□□ 1.38
APPP05067 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
APPP05067 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
APPP05067 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.69■■□□□ 1.38
APPP05067 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
APPP05067 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC23.69■■□□□ 1.38
APPP05067 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
APPP05067 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
APPP05067 AC018553.1-201ENST00000616682 1458 ntBASIC23.68■■□□□ 1.38
APPP05067 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.68■■□□□ 1.38
APPP05067 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.68■■□□□ 1.38
APPP05067 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
APPP05067 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
APPP05067 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
APPP05067 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
APPP05067 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
APPP05067 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
APPP05067 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.68■■□□□ 1.38
APPP05067 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
APPP05067 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.68■■□□□ 1.38
APPP05067 KRASP1-201ENST00000407852 552 ntBASIC23.68■■□□□ 1.38
APPP05067 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
APPP05067 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.68■■□□□ 1.38
APPP05067 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.68■■□□□ 1.38
APPP05067 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.68■■□□□ 1.38
APPP05067 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.68■■□□□ 1.38
APPP05067 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
APPP05067 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.68■■□□□ 1.38
APPP05067 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
APPP05067 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
APPP05067 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.68■■□□□ 1.38
APPP05067 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
APPP05067 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
APPP05067 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
APPP05067 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
APPP05067 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
APPP05067 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.67■■□□□ 1.38
APPP05067 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
APPP05067 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
APPP05067 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
APPP05067 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.67■■□□□ 1.38
APPP05067 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
APPP05067 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.67■■□□□ 1.38
APPP05067 SLC25A24-204ENST00000569674 2357 ntBASIC23.67■■□□□ 1.38
APPP05067 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.67■■□□□ 1.38
APPP05067 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
APPP05067 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
APPP05067 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
APPP05067 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
APPP05067 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
APPP05067 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
APPP05067 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC23.66■■□□□ 1.38
APPP05067 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
APPP05067 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.66■■□□□ 1.38
APPP05067 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
APPP05067 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
APPP05067 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC23.66■■□□□ 1.38
APPP05067 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.66■■□□□ 1.38
APPP05067 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.66■■□□□ 1.38
APPP05067 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC23.66■■□□□ 1.38
APPP05067 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.66■■□□□ 1.38
APPP05067 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.66■■□□□ 1.38
APPP05067 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.66■■□□□ 1.38
APPP05067 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.65■■□□□ 1.38
APPP05067 AC116351.2-201ENST00000606540 1585 ntBASIC23.65■■□□□ 1.38
APPP05067 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
APPP05067 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
APPP05067 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
APPP05067 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
APPP05067 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
APPP05067 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
APPP05067 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
APPP05067 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.65■■□□□ 1.38
APPP05067 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.65■■□□□ 1.38
APPP05067 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms