Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC006333.2-201ENST00000607957 2099 ntBASIC17.07■□□□□ 0.32
HLA-DQB1P01920 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HLA-DQB1P01920 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 RASA4CP-201ENST00000424092 1398 ntBASIC17.06■□□□□ 0.32
HLA-DQB1P01920 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 AC096631.2-201ENST00000436136 790 ntBASIC17.06■□□□□ 0.32
HLA-DQB1P01920 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 AP001330.3-201ENST00000520123 633 ntBASIC17.06■□□□□ 0.32
HLA-DQB1P01920 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.06■□□□□ 0.32
HLA-DQB1P01920 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HLA-DQB1P01920 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 AC131212.1-201ENST00000613771 668 ntBASIC17.05■□□□□ 0.32
HLA-DQB1P01920 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB1P01920 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 AC120498.9-201ENST00000339021 3867 ntBASIC17.04■□□□□ 0.32
HLA-DQB1P01920 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 AC012414.1-201ENST00000556676 535 ntBASIC17.04■□□□□ 0.32
HLA-DQB1P01920 AL355001.2-201ENST00000620617 1191 ntBASIC17.04■□□□□ 0.32
HLA-DQB1P01920 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 WIZP1-201ENST00000531444 2299 ntBASIC17.04■□□□□ 0.32
HLA-DQB1P01920 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB1P01920 AC008406.3-201ENST00000620001 1374 ntBASIC17.03■□□□□ 0.32
HLA-DQB1P01920 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HLA-DQB1P01920 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB1P01920 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQB1P01920 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DQB1P01920 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DQB1P01920 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB1P01920 AL161938.1-201ENST00000569833 2180 ntBASIC17.03■□□□□ 0.32
HLA-DQB1P01920 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB1P01920 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB1P01920 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQB1P01920 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB1P01920 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB1P01920 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DQB1P01920 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DQB1P01920 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQB1P01920 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms