Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AC073648.6-201ENST00000641589 218 ntBASIC15.29■□□□□ 0.04
TRBV12-3P01733 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV12-3P01733 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV12-3P01733 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
TRBV12-3P01733 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV12-3P01733 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV12-3P01733 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV12-3P01733 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV12-3P01733 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV12-3P01733 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV12-3P01733 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV12-3P01733 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV12-3P01733 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV12-3P01733 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV12-3P01733 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV12-3P01733 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV12-3P01733 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV12-3P01733 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV12-3P01733 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV12-3P01733 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV12-3P01733 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 AC128676.1-201ENST00000454392 318 ntBASIC15.28■□□□□ 0.04
TRBV12-3P01733 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV12-3P01733 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRBV12-3P01733 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV12-3P01733 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV12-3P01733 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV12-3P01733 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV12-3P01733 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV12-3P01733 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV12-3P01733 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV12-3P01733 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV12-3P01733 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.27■□□□□ 0.04
TRBV12-3P01733 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV12-3P01733 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV12-3P01733 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRBV12-3P01733 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.27■□□□□ 0.04
TRBV12-3P01733 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRBV12-3P01733 KRT17P3-201ENST00000420566 1262 ntBASIC15.27■□□□□ 0.04
TRBV12-3P01733 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV12-3P01733 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.27■□□□□ 0.04
TRBV12-3P01733 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV12-3P01733 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV12-3P01733 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
TRBV12-3P01733 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV12-3P01733 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.27■□□□□ 0.04
TRBV12-3P01733 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.27■□□□□ 0.03
TRBV12-3P01733 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.27■□□□□ 0.03
TRBV12-3P01733 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV12-3P01733 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV12-3P01733 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV12-3P01733 AC116351.2-201ENST00000606540 1585 ntBASIC15.27■□□□□ 0.03
TRBV12-3P01733 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV12-3P01733 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV12-3P01733 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV12-3P01733 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV12-3P01733 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV12-3P01733 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV12-3P01733 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV12-3P01733 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRBV12-3P01733 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV12-3P01733 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV12-3P01733 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV12-3P01733 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV12-3P01733 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV12-3P01733 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV12-3P01733 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV12-3P01733 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TRBV12-3P01733 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV12-3P01733 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV12-3P01733 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.26■□□□□ 0.03
TRBV12-3P01733 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV12-3P01733 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV12-3P01733 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV12-3P01733 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV12-3P01733 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV12-3P01733 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV12-3P01733 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV12-3P01733 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV12-3P01733 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV12-3P01733 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRBV12-3P01733 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV12-3P01733 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV12-3P01733 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms