Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AL049796.1-201ENST00000565336 1766 ntBASIC21.49■■□□□ 1.03
TIMP1P01033 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TIMP1P01033 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TIMP1P01033 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TIMP1P01033 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TIMP1P01033 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TIMP1P01033 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.49■■□□□ 1.03
TIMP1P01033 AL353719.1-201ENST00000566847 864 ntBASIC21.49■■□□□ 1.03
TIMP1P01033 AC140113.3-201ENST00000605663 199 ntBASIC21.49■■□□□ 1.03
TIMP1P01033 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.49■■□□□ 1.03
TIMP1P01033 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
TIMP1P01033 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.49■■□□□ 1.03
TIMP1P01033 AC005332.1-201ENST00000577698 1310 ntBASIC21.49■■□□□ 1.03
TIMP1P01033 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TIMP1P01033 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.49■■□□□ 1.03
TIMP1P01033 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TIMP1P01033 KRT16P6-202ENST00000425692 1426 ntBASIC21.48■■□□□ 1.03
TIMP1P01033 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TIMP1P01033 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TIMP1P01033 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TIMP1P01033 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TIMP1P01033 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.48■■□□□ 1.03
TIMP1P01033 AL359075.1-203ENST00000462729 1002 ntBASIC21.48■■□□□ 1.03
TIMP1P01033 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.48■■□□□ 1.03
TIMP1P01033 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.48■■□□□ 1.03
TIMP1P01033 CLEC4GP1-201ENST00000596555 870 ntBASIC21.48■■□□□ 1.03
TIMP1P01033 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TIMP1P01033 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TIMP1P01033 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
TIMP1P01033 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TIMP1P01033 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.48■■□□□ 1.03
TIMP1P01033 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.47■■□□□ 1.03
TIMP1P01033 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
TIMP1P01033 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.47■■□□□ 1.03
TIMP1P01033 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.47■■□□□ 1.03
TIMP1P01033 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TIMP1P01033 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TIMP1P01033 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TIMP1P01033 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TIMP1P01033 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
TIMP1P01033 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TIMP1P01033 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TIMP1P01033 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TIMP1P01033 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.47■■□□□ 1.03
TIMP1P01033 Z98882.1-201ENST00000622160 2253 ntBASIC21.46■■□□□ 1.03
TIMP1P01033 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.46■■□□□ 1.03
TIMP1P01033 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TIMP1P01033 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TIMP1P01033 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.46■■□□□ 1.03
TIMP1P01033 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TIMP1P01033 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.46■■□□□ 1.03
TIMP1P01033 AC233723.2-201ENST00000623798 2106 ntBASIC21.46■■□□□ 1.03
TIMP1P01033 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TIMP1P01033 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TIMP1P01033 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TIMP1P01033 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TIMP1P01033 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TIMP1P01033 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TIMP1P01033 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TIMP1P01033 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TIMP1P01033 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.46■■□□□ 1.03
TIMP1P01033 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TIMP1P01033 AL441883.1-201ENST00000566170 1045 ntBASIC21.46■■□□□ 1.03
TIMP1P01033 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.46■■□□□ 1.03
TIMP1P01033 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.46■■□□□ 1.03
TIMP1P01033 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TIMP1P01033 ECEL1P1-201ENST00000373592 1742 ntBASIC21.46■■□□□ 1.03
TIMP1P01033 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TIMP1P01033 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.45■■□□□ 1.03
TIMP1P01033 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TIMP1P01033 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
TIMP1P01033 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TIMP1P01033 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TIMP1P01033 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TIMP1P01033 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TIMP1P01033 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TIMP1P01033 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TIMP1P01033 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TIMP1P01033 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.45■■□□□ 1.02
TIMP1P01033 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.45■■□□□ 1.02
TIMP1P01033 AC069148.1-201ENST00000608741 768 ntBASIC21.45■■□□□ 1.02
TIMP1P01033 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.45■■□□□ 1.02
TIMP1P01033 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TIMP1P01033 AC005229.4-201ENST00000610085 2198 ntBASIC21.45■■□□□ 1.02
TIMP1P01033 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TIMP1P01033 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TIMP1P01033 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TIMP1P01033 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TIMP1P01033 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TIMP1P01033 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.45■■□□□ 1.02
TIMP1P01033 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.44■■□□□ 1.02
TIMP1P01033 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.44■■□□□ 1.02
TIMP1P01033 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TIMP1P01033 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.44■■□□□ 1.02
TIMP1P01033 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TIMP1P01033 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.44■■□□□ 1.02
TIMP1P01033 PRSS44-201ENST00000515154 1146 ntBASIC21.44■■□□□ 1.02
TIMP1P01033 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.44■■□□□ 1.02
TIMP1P01033 AC008622.2-201ENST00000617006 1229 ntBASIC21.44■■□□□ 1.02
TIMP1P01033 AL023973.1-201ENST00000624619 620 ntBASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms