Protein–RNA interactions for Protein: P00746

CFD, Complement factor D, humanhuman

Predicted RBP Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP00746 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CFDP00746 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFDP00746 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CFDP00746 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
CFDP00746 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFDP00746 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.4■□□□□ 0.22
CFDP00746 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CFDP00746 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFDP00746 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFDP00746 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.4■□□□□ 0.22
CFDP00746 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.4■□□□□ 0.22
CFDP00746 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.4■□□□□ 0.22
CFDP00746 AL356441.2-201ENST00000443009 864 ntBASIC16.4■□□□□ 0.22
CFDP00746 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.4■□□□□ 0.22
CFDP00746 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CFDP00746 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CFDP00746 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.4■□□□□ 0.22
CFDP00746 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CFDP00746 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CFDP00746 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.4■□□□□ 0.22
CFDP00746 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CFDP00746 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFDP00746 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFDP00746 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFDP00746 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CFDP00746 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFDP00746 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CFDP00746 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.4■□□□□ 0.22
CFDP00746 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFDP00746 AP006587.3-201ENST00000525742 1516 ntBASIC16.4■□□□□ 0.22
CFDP00746 BX005040.4-201ENST00000637145 1518 ntBASIC16.4■□□□□ 0.22
CFDP00746 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CFDP00746 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
CFDP00746 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFDP00746 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CFDP00746 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CFDP00746 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CFDP00746 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.39■□□□□ 0.21
CFDP00746 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CFDP00746 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CFDP00746 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
CFDP00746 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFDP00746 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CFDP00746 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.39■□□□□ 0.21
CFDP00746 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFDP00746 SLC47A1P1-202ENST00000449666 945 ntBASIC16.39■□□□□ 0.21
CFDP00746 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CFDP00746 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFDP00746 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CFDP00746 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.39■□□□□ 0.21
CFDP00746 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CFDP00746 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.39■□□□□ 0.21
CFDP00746 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CFDP00746 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.39■□□□□ 0.21
CFDP00746 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFDP00746 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFDP00746 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CFDP00746 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFDP00746 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFDP00746 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.38■□□□□ 0.21
CFDP00746 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CFDP00746 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.38■□□□□ 0.21
CFDP00746 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CFDP00746 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.38■□□□□ 0.21
CFDP00746 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.38■□□□□ 0.21
CFDP00746 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.38■□□□□ 0.21
CFDP00746 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CFDP00746 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.38■□□□□ 0.21
CFDP00746 AC124067.4-201ENST00000519691 2379 ntBASIC16.38■□□□□ 0.21
CFDP00746 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CFDP00746 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.38■□□□□ 0.21
CFDP00746 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFDP00746 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CFDP00746 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.37■□□□□ 0.21
CFDP00746 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFDP00746 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFDP00746 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CFDP00746 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFDP00746 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.37■□□□□ 0.21
CFDP00746 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CFDP00746 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CFDP00746 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms