Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 NUDT16P1-203ENST00000513809 620 ntBASIC22.23■■□□□ 1.15
GGPS1O95749 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.23■■□□□ 1.15
GGPS1O95749 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.23■■□□□ 1.15
GGPS1O95749 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
GGPS1O95749 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.23■■□□□ 1.15
GGPS1O95749 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.23■■□□□ 1.15
GGPS1O95749 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
GGPS1O95749 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GGPS1O95749 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.22■■□□□ 1.15
GGPS1O95749 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GGPS1O95749 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GGPS1O95749 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GGPS1O95749 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GGPS1O95749 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GGPS1O95749 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.22■■□□□ 1.15
GGPS1O95749 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
GGPS1O95749 CR392000.1-201ENST00000624770 1228 ntBASIC22.22■■□□□ 1.15
GGPS1O95749 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
GGPS1O95749 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
GGPS1O95749 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
GGPS1O95749 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.22■■□□□ 1.15
GGPS1O95749 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
GGPS1O95749 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
GGPS1O95749 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GGPS1O95749 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.21■■□□□ 1.15
GGPS1O95749 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GGPS1O95749 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GGPS1O95749 KSR1P1-201ENST00000446298 240 ntBASIC22.21■■□□□ 1.15
GGPS1O95749 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.21■■□□□ 1.15
GGPS1O95749 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.21■■□□□ 1.15
GGPS1O95749 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
GGPS1O95749 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
GGPS1O95749 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GGPS1O95749 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
GGPS1O95749 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
GGPS1O95749 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
GGPS1O95749 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
GGPS1O95749 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.21■■□□□ 1.15
GGPS1O95749 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
GGPS1O95749 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
GGPS1O95749 PHGDH-210ENST00000641115 1638 ntBASIC22.2■■□□□ 1.15
GGPS1O95749 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.2■■□□□ 1.14
GGPS1O95749 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
GGPS1O95749 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
GGPS1O95749 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
GGPS1O95749 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
GGPS1O95749 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.2■■□□□ 1.14
GGPS1O95749 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.2■■□□□ 1.14
GGPS1O95749 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.2■■□□□ 1.14
GGPS1O95749 REXO1L10P-201ENST00000615707 1290 ntBASIC22.2■■□□□ 1.14
GGPS1O95749 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
GGPS1O95749 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
GGPS1O95749 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
GGPS1O95749 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.2■■□□□ 1.14
GGPS1O95749 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
GGPS1O95749 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
GGPS1O95749 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
GGPS1O95749 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
GGPS1O95749 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.19■■□□□ 1.14
GGPS1O95749 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GGPS1O95749 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
GGPS1O95749 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
GGPS1O95749 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GGPS1O95749 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GGPS1O95749 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
GGPS1O95749 C1QL1P1-201ENST00000568105 661 ntBASIC22.19■■□□□ 1.14
GGPS1O95749 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GGPS1O95749 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.19■■□□□ 1.14
GGPS1O95749 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
GGPS1O95749 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GGPS1O95749 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
GGPS1O95749 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
GGPS1O95749 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
GGPS1O95749 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
GGPS1O95749 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
GGPS1O95749 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.18■■□□□ 1.14
GGPS1O95749 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.18■■□□□ 1.14
GGPS1O95749 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.18■■□□□ 1.14
GGPS1O95749 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
GGPS1O95749 KRT16P1-201ENST00000399124 1418 ntBASIC22.18■■□□□ 1.14
GGPS1O95749 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC22.18■■□□□ 1.14
GGPS1O95749 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.18■■□□□ 1.14
GGPS1O95749 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.18■■□□□ 1.14
GGPS1O95749 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
GGPS1O95749 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC22.18■■□□□ 1.14
GGPS1O95749 YBX1P10-201ENST00000444752 975 ntBASIC22.18■■□□□ 1.14
GGPS1O95749 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.18■■□□□ 1.14
GGPS1O95749 RBM17P1-201ENST00000453646 1190 ntBASIC22.18■■□□□ 1.14
GGPS1O95749 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.18■■□□□ 1.14
GGPS1O95749 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.18■■□□□ 1.14
GGPS1O95749 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
GGPS1O95749 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.18■■□□□ 1.14
GGPS1O95749 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
GGPS1O95749 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GGPS1O95749 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
GGPS1O95749 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GGPS1O95749 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
GGPS1O95749 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
GGPS1O95749 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
GGPS1O95749 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms