Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC8.87□□□□□ -0.99
USH2AO75445 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 AL512604.3-201ENST00000569583 964 ntBASIC8.87□□□□□ -0.99
USH2AO75445 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC8.87□□□□□ -0.99
USH2AO75445 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC8.87□□□□□ -0.99
USH2AO75445 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
USH2AO75445 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC8.87□□□□□ -0.99
USH2AO75445 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
USH2AO75445 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC8.87□□□□□ -0.99
USH2AO75445 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC8.87□□□□□ -0.99
USH2AO75445 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
USH2AO75445 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC8.87□□□□□ -0.99
USH2AO75445 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC8.87□□□□□ -0.99
USH2AO75445 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
USH2AO75445 KRT8P36-201ENST00000489121 1440 ntBASIC8.87□□□□□ -0.99
USH2AO75445 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC8.87□□□□□ -0.99
USH2AO75445 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
USH2AO75445 NUS1P1-201ENST00000446295 882 ntBASIC8.87□□□□□ -0.99
USH2AO75445 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC8.87□□□□□ -0.99
USH2AO75445 POLD2P1-201ENST00000511220 997 ntBASIC8.87□□□□□ -0.99
USH2AO75445 LY6E-213ENST00000522528 606 ntTSL 3 BASIC8.87□□□□□ -0.99
USH2AO75445 AL353719.1-201ENST00000566847 864 ntBASIC8.87□□□□□ -0.99
USH2AO75445 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC8.87□□□□□ -0.99
USH2AO75445 CALM3-211ENST00000598871 561 ntTSL 4 BASIC8.87□□□□□ -0.99
USH2AO75445 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
USH2AO75445 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
USH2AO75445 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC8.86□□□□□ -0.99
USH2AO75445 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC8.86□□□□□ -0.99
USH2AO75445 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 AC004870.1-201ENST00000315132 882 ntBASIC8.86□□□□□ -0.99
USH2AO75445 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC8.86□□□□□ -0.99
USH2AO75445 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC8.86□□□□□ -0.99
USH2AO75445 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC8.86□□□□□ -0.99
USH2AO75445 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC8.86□□□□□ -0.99
USH2AO75445 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
USH2AO75445 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC8.86□□□□□ -0.99
USH2AO75445 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC8.86□□□□□ -0.99
USH2AO75445 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
USH2AO75445 FAM220CP-201ENST00000395253 831 ntBASIC8.86□□□□□ -0.99
USH2AO75445 AC005104.2-201ENST00000427818 678 ntBASIC8.86□□□□□ -0.99
USH2AO75445 MIR3197-201ENST00000582241 73 ntBASIC8.86□□□□□ -0.99
USH2AO75445 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC8.86□□□□□ -0.99
USH2AO75445 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 AC016734.2-201ENST00000624325 1377 ntBASIC8.86□□□□□ -0.99
USH2AO75445 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC8.86□□□□□ -0.99
USH2AO75445 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC8.86□□□□□ -0.99
USH2AO75445 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
USH2AO75445 AC117500.6-201ENST00000624871 588 ntBASIC8.86□□□□□ -0.99
USH2AO75445 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
USH2AO75445 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
USH2AO75445 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC8.86□□□□□ -0.99
USH2AO75445 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC8.86□□□□□ -0.99
USH2AO75445 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC8.86□□□□□ -0.99
USH2AO75445 AC112497.1-201ENST00000624824 639 ntBASIC8.86□□□□□ -0.99
USH2AO75445 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
USH2AO75445 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC8.85□□□□□ -0.99
USH2AO75445 ANKRD20A18P-201ENST00000359341 492 ntBASIC8.85□□□□□ -0.99
USH2AO75445 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
USH2AO75445 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC8.85□□□□□ -0.99
USH2AO75445 CYGB-204ENST00000589342 815 ntTSL 3 BASIC8.85□□□□□ -0.99
USH2AO75445 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
USH2AO75445 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
USH2AO75445 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC8.85□□□□□ -0.99
USH2AO75445 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
USH2AO75445 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC8.85□□□□□ -0.99
USH2AO75445 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
USH2AO75445 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
USH2AO75445 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms