Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.41■□□□□ 0.54
PRKNO60260 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.41■□□□□ 0.54
PRKNO60260 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PRKNO60260 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
PRKNO60260 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.41■□□□□ 0.54
PRKNO60260 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRKNO60260 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
PRKNO60260 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
PRKNO60260 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRKNO60260 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRKNO60260 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRKNO60260 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PRKNO60260 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.41■□□□□ 0.54
PRKNO60260 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.41■□□□□ 0.54
PRKNO60260 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRKNO60260 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRKNO60260 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRKNO60260 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRKNO60260 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.4■□□□□ 0.54
PRKNO60260 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.4■□□□□ 0.54
PRKNO60260 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.4■□□□□ 0.54
PRKNO60260 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.4■□□□□ 0.54
PRKNO60260 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PRKNO60260 AL121829.2-201ENST00000620908 328 ntBASIC18.4■□□□□ 0.54
PRKNO60260 FAM197Y4-202ENST00000622692 608 ntBASIC18.4■□□□□ 0.54
PRKNO60260 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRKNO60260 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRKNO60260 KRT16P6-202ENST00000425692 1426 ntBASIC18.4■□□□□ 0.54
PRKNO60260 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRKNO60260 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRKNO60260 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PRKNO60260 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PRKNO60260 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PRKNO60260 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PRKNO60260 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PRKNO60260 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRKNO60260 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRKNO60260 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.39■□□□□ 0.53
PRKNO60260 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.39■□□□□ 0.53
PRKNO60260 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRKNO60260 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRKNO60260 KRASP1-201ENST00000407852 552 ntBASIC18.39■□□□□ 0.53
PRKNO60260 AC239809.2-201ENST00000415381 517 ntBASIC18.39■□□□□ 0.53
PRKNO60260 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.39■□□□□ 0.53
PRKNO60260 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRKNO60260 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRKNO60260 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRKNO60260 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.39■□□□□ 0.53
PRKNO60260 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.39■□□□□ 0.53
PRKNO60260 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRKNO60260 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRKNO60260 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.39■□□□□ 0.53
PRKNO60260 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRKNO60260 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.39■□□□□ 0.53
PRKNO60260 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRKNO60260 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRKNO60260 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.39■□□□□ 0.53
PRKNO60260 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.39■□□□□ 0.53
PRKNO60260 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.38■□□□□ 0.53
PRKNO60260 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
PRKNO60260 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PRKNO60260 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.38■□□□□ 0.53
PRKNO60260 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRKNO60260 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRKNO60260 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRKNO60260 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRKNO60260 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRKNO60260 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRKNO60260 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.38■□□□□ 0.53
PRKNO60260 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.38■□□□□ 0.53
PRKNO60260 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.38■□□□□ 0.53
PRKNO60260 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.38■□□□□ 0.53
PRKNO60260 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.38■□□□□ 0.53
PRKNO60260 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.38■□□□□ 0.53
PRKNO60260 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.38■□□□□ 0.53
PRKNO60260 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.38■□□□□ 0.53
PRKNO60260 AL121906.2-201ENST00000621597 723 ntBASIC18.38■□□□□ 0.53
PRKNO60260 TCF3P1-201ENST00000423021 1937 ntBASIC18.38■□□□□ 0.53
PRKNO60260 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PRKNO60260 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRKNO60260 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRKNO60260 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRKNO60260 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRKNO60260 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.38■□□□□ 0.53
PRKNO60260 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.38■□□□□ 0.53
PRKNO60260 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRKNO60260 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRKNO60260 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PRKNO60260 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRKNO60260 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRKNO60260 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRKNO60260 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.37■□□□□ 0.53
PRKNO60260 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRKNO60260 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRKNO60260 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PRKNO60260 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRKNO60260 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.37■□□□□ 0.53
PRKNO60260 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.37■□□□□ 0.53
PRKNO60260 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRKNO60260 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms