Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.62■□□□□ 0.41
TRAF3IP2O43734 RPS2P52-201ENST00000469610 820 ntBASIC17.62■□□□□ 0.41
TRAF3IP2O43734 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAF3IP2O43734 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 UNC93B5-201ENST00000530315 699 ntBASIC17.61■□□□□ 0.41
TRAF3IP2O43734 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAF3IP2O43734 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF3IP2O43734 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 UNC93B4-201ENST00000505679 747 ntBASIC17.59■□□□□ 0.41
TRAF3IP2O43734 RNA5SP413-201ENST00000516373 109 ntBASIC17.59■□□□□ 0.41
TRAF3IP2O43734 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 KRT18P6-201ENST00000555540 1265 ntBASIC17.59■□□□□ 0.41
TRAF3IP2O43734 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 AC008687.6-201ENST00000596318 630 ntBASIC17.59■□□□□ 0.41
TRAF3IP2O43734 AC120498.8-201ENST00000614275 531 ntBASIC17.59■□□□□ 0.41
TRAF3IP2O43734 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAF3IP2O43734 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TRAF3IP2O43734 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms