Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KDELR3O43731 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.1■□□□□ 0.81
KDELR3O43731 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KDELR3O43731 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KDELR3O43731 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
KDELR3O43731 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.1■□□□□ 0.81
KDELR3O43731 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KDELR3O43731 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KDELR3O43731 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KDELR3O43731 TMEM179-206ENST00000616017 1645 ntBASIC20.09■□□□□ 0.81
KDELR3O43731 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KDELR3O43731 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KDELR3O43731 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
KDELR3O43731 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KDELR3O43731 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.09■□□□□ 0.81
KDELR3O43731 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
KDELR3O43731 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.09■□□□□ 0.81
KDELR3O43731 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.09■□□□□ 0.81
KDELR3O43731 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
KDELR3O43731 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.09■□□□□ 0.81
KDELR3O43731 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.09■□□□□ 0.81
KDELR3O43731 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
KDELR3O43731 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KDELR3O43731 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KDELR3O43731 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KDELR3O43731 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.08■□□□□ 0.81
KDELR3O43731 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.08■□□□□ 0.81
KDELR3O43731 UBE2SP1-201ENST00000450587 669 ntBASIC20.08■□□□□ 0.81
KDELR3O43731 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
KDELR3O43731 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.08■□□□□ 0.81
KDELR3O43731 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.08■□□□□ 0.81
KDELR3O43731 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.08■□□□□ 0.81
KDELR3O43731 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
KDELR3O43731 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KDELR3O43731 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KDELR3O43731 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.08■□□□□ 0.8
KDELR3O43731 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KDELR3O43731 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.08■□□□□ 0.8
KDELR3O43731 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.08■□□□□ 0.8
KDELR3O43731 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KDELR3O43731 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
KDELR3O43731 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KDELR3O43731 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KDELR3O43731 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
KDELR3O43731 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
KDELR3O43731 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KDELR3O43731 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KDELR3O43731 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KDELR3O43731 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KDELR3O43731 YBX1P10-201ENST00000444752 975 ntBASIC20.07■□□□□ 0.8
KDELR3O43731 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.07■□□□□ 0.8
KDELR3O43731 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
KDELR3O43731 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.07■□□□□ 0.8
KDELR3O43731 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KDELR3O43731 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KDELR3O43731 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KDELR3O43731 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KDELR3O43731 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KDELR3O43731 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KDELR3O43731 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.06■□□□□ 0.8
KDELR3O43731 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KDELR3O43731 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
KDELR3O43731 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KDELR3O43731 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
KDELR3O43731 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.06■□□□□ 0.8
KDELR3O43731 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KDELR3O43731 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KDELR3O43731 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KDELR3O43731 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KDELR3O43731 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
KDELR3O43731 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.06■□□□□ 0.8
KDELR3O43731 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.06■□□□□ 0.8
KDELR3O43731 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.06■□□□□ 0.8
KDELR3O43731 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.06■□□□□ 0.8
KDELR3O43731 AC004264.1-201ENST00000608354 794 ntBASIC20.06■□□□□ 0.8
KDELR3O43731 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.06■□□□□ 0.8
KDELR3O43731 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.06■□□□□ 0.8
KDELR3O43731 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
KDELR3O43731 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KDELR3O43731 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KDELR3O43731 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.06■□□□□ 0.8
KDELR3O43731 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KDELR3O43731 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
KDELR3O43731 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDELR3O43731 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KDELR3O43731 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDELR3O43731 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KDELR3O43731 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.05■□□□□ 0.8
KDELR3O43731 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDELR3O43731 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDELR3O43731 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KDELR3O43731 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDELR3O43731 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDELR3O43731 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KDELR3O43731 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KDELR3O43731 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.05■□□□□ 0.8
KDELR3O43731 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KDELR3O43731 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KDELR3O43731 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KDELR3O43731 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms