Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.56■□□□□ 0.88
MSI1O43347 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MSI1O43347 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MSI1O43347 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MSI1O43347 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
MSI1O43347 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.55■□□□□ 0.88
MSI1O43347 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MSI1O43347 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MSI1O43347 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.55■□□□□ 0.88
MSI1O43347 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
MSI1O43347 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MSI1O43347 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MSI1O43347 UBE2SP1-201ENST00000450587 669 ntBASIC20.55■□□□□ 0.88
MSI1O43347 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
MSI1O43347 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.55■□□□□ 0.88
MSI1O43347 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.55■□□□□ 0.88
MSI1O43347 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.55■□□□□ 0.88
MSI1O43347 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.55■□□□□ 0.88
MSI1O43347 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MSI1O43347 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MSI1O43347 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MSI1O43347 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.55■□□□□ 0.88
MSI1O43347 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
MSI1O43347 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
MSI1O43347 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.55■□□□□ 0.88
MSI1O43347 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MSI1O43347 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.54■□□□□ 0.88
MSI1O43347 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.54■□□□□ 0.88
MSI1O43347 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MSI1O43347 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
MSI1O43347 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.54■□□□□ 0.88
MSI1O43347 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.54■□□□□ 0.88
MSI1O43347 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MSI1O43347 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MSI1O43347 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MSI1O43347 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
MSI1O43347 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.54■□□□□ 0.88
MSI1O43347 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.54■□□□□ 0.88
MSI1O43347 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.54■□□□□ 0.88
MSI1O43347 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.54■□□□□ 0.88
MSI1O43347 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.54■□□□□ 0.88
MSI1O43347 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MSI1O43347 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
MSI1O43347 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.54■□□□□ 0.88
MSI1O43347 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
MSI1O43347 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
MSI1O43347 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MSI1O43347 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
MSI1O43347 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSI1O43347 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MSI1O43347 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSI1O43347 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.53■□□□□ 0.88
MSI1O43347 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MSI1O43347 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
MSI1O43347 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MSI1O43347 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
MSI1O43347 TCF3P1-201ENST00000423021 1937 ntBASIC20.53■□□□□ 0.88
MSI1O43347 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.53■□□□□ 0.88
MSI1O43347 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSI1O43347 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.53■□□□□ 0.88
MSI1O43347 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.53■□□□□ 0.88
MSI1O43347 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.53■□□□□ 0.88
MSI1O43347 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSI1O43347 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSI1O43347 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.53■□□□□ 0.88
MSI1O43347 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
MSI1O43347 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MSI1O43347 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MSI1O43347 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MSI1O43347 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MSI1O43347 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MSI1O43347 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MSI1O43347 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MSI1O43347 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.52■□□□□ 0.88
MSI1O43347 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MSI1O43347 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
MSI1O43347 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MSI1O43347 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MSI1O43347 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.52■□□□□ 0.88
MSI1O43347 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.52■□□□□ 0.88
MSI1O43347 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MSI1O43347 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
MSI1O43347 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.52■□□□□ 0.88
MSI1O43347 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.52■□□□□ 0.88
MSI1O43347 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.52■□□□□ 0.88
MSI1O43347 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
MSI1O43347 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MSI1O43347 AP006587.1-201ENST00000534129 1502 ntBASIC20.52■□□□□ 0.87
MSI1O43347 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
MSI1O43347 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
MSI1O43347 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.52■□□□□ 0.87
MSI1O43347 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MSI1O43347 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
MSI1O43347 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.51■□□□□ 0.87
MSI1O43347 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MSI1O43347 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.51■□□□□ 0.87
MSI1O43347 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.51■□□□□ 0.87
MSI1O43347 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MSI1O43347 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.51■□□□□ 0.87
MSI1O43347 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms