Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
PHGDHO43175 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHGDHO43175 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHGDHO43175 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.64■□□□□ 0.73
PHGDHO43175 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHGDHO43175 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHGDHO43175 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PHGDHO43175 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.63■□□□□ 0.73
PHGDHO43175 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHGDHO43175 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.63■□□□□ 0.73
PHGDHO43175 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.63■□□□□ 0.73
PHGDHO43175 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHGDHO43175 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHGDHO43175 AC018445.3-201ENST00000624177 1945 ntBASIC19.63■□□□□ 0.73
PHGDHO43175 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHGDHO43175 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.63■□□□□ 0.73
PHGDHO43175 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.63■□□□□ 0.73
PHGDHO43175 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHGDHO43175 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
PHGDHO43175 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PHGDHO43175 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHGDHO43175 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.63■□□□□ 0.73
PHGDHO43175 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHGDHO43175 AC092437.1-201ENST00000624794 1048 ntBASIC19.63■□□□□ 0.73
PHGDHO43175 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.63■□□□□ 0.73
PHGDHO43175 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PHGDHO43175 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHGDHO43175 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHGDHO43175 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHGDHO43175 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PHGDHO43175 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
PHGDHO43175 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHGDHO43175 AP001271.2-201ENST00000624018 1556 ntBASIC19.62■□□□□ 0.73
PHGDHO43175 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.62■□□□□ 0.73
PHGDHO43175 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHGDHO43175 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PHGDHO43175 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHGDHO43175 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHGDHO43175 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHGDHO43175 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHGDHO43175 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.62■□□□□ 0.73
PHGDHO43175 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.62■□□□□ 0.73
PHGDHO43175 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHGDHO43175 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.62■□□□□ 0.73
PHGDHO43175 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.62■□□□□ 0.73
PHGDHO43175 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
PHGDHO43175 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PHGDHO43175 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PHGDHO43175 IKBKGP1-201ENST00000612193 1073 ntBASIC19.62■□□□□ 0.73
PHGDHO43175 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.62■□□□□ 0.73
PHGDHO43175 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.62■□□□□ 0.73
PHGDHO43175 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.62■□□□□ 0.73
PHGDHO43175 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHGDHO43175 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.62■□□□□ 0.73
PHGDHO43175 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHGDHO43175 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.62■□□□□ 0.73
PHGDHO43175 PHGDH-210ENST00000641115 1638 ntBASIC19.62■□□□□ 0.73
PHGDHO43175 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHGDHO43175 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.61■□□□□ 0.73
PHGDHO43175 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHGDHO43175 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.61■□□□□ 0.73
PHGDHO43175 AP000974.1-201ENST00000623909 2387 ntBASIC19.61■□□□□ 0.73
PHGDHO43175 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.61■□□□□ 0.73
PHGDHO43175 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHGDHO43175 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PHGDHO43175 AL512625.2-201ENST00000417533 625 ntBASIC19.61■□□□□ 0.73
PHGDHO43175 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.61■□□□□ 0.73
PHGDHO43175 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PHGDHO43175 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.61■□□□□ 0.73
PHGDHO43175 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.61■□□□□ 0.73
PHGDHO43175 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHGDHO43175 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHGDHO43175 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.61■□□□□ 0.73
PHGDHO43175 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHGDHO43175 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.61■□□□□ 0.73
PHGDHO43175 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PHGDHO43175 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PHGDHO43175 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
PHGDHO43175 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHGDHO43175 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PHGDHO43175 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
PHGDHO43175 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PHGDHO43175 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PHGDHO43175 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHGDHO43175 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PHGDHO43175 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.6■□□□□ 0.73
PHGDHO43175 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHGDHO43175 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHGDHO43175 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PHGDHO43175 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.6■□□□□ 0.73
PHGDHO43175 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PHGDHO43175 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHGDHO43175 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHGDHO43175 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PHGDHO43175 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PHGDHO43175 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PHGDHO43175 AC023632.3-201ENST00000521633 145 ntBASIC19.6■□□□□ 0.73
PHGDHO43175 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.6■□□□□ 0.73
PHGDHO43175 AC080038.1-201ENST00000611274 1154 ntBASIC19.6■□□□□ 0.73
PHGDHO43175 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms