Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNRC18O15417 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.72■■□□□ 1.07
TNRC18O15417 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TNRC18O15417 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNRC18O15417 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TNRC18O15417 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.72■■□□□ 1.07
TNRC18O15417 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.72■■□□□ 1.07
TNRC18O15417 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TNRC18O15417 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TNRC18O15417 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNRC18O15417 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TNRC18O15417 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.72■■□□□ 1.07
TNRC18O15417 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.72■■□□□ 1.07
TNRC18O15417 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TNRC18O15417 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TNRC18O15417 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNRC18O15417 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNRC18O15417 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TNRC18O15417 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNRC18O15417 AC098831.1-202ENST00000438821 336 ntBASIC21.71■■□□□ 1.07
TNRC18O15417 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.71■■□□□ 1.07
TNRC18O15417 AP002414.4-201ENST00000589764 1148 ntBASIC21.71■■□□□ 1.07
TNRC18O15417 TERC-201ENST00000602385 541 ntBASIC21.71■■□□□ 1.07
TNRC18O15417 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TNRC18O15417 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TNRC18O15417 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.71■■□□□ 1.07
TNRC18O15417 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNRC18O15417 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TNRC18O15417 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
TNRC18O15417 TSSC2-201ENST00000450217 709 ntBASIC21.71■■□□□ 1.07
TNRC18O15417 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TNRC18O15417 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.71■■□□□ 1.07
TNRC18O15417 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.71■■□□□ 1.07
TNRC18O15417 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.71■■□□□ 1.07
TNRC18O15417 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TNRC18O15417 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TNRC18O15417 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TNRC18O15417 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.7■■□□□ 1.06
TNRC18O15417 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.7■■□□□ 1.06
TNRC18O15417 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.7■■□□□ 1.06
TNRC18O15417 NEK4P2-201ENST00000580004 1012 ntBASIC21.7■■□□□ 1.06
TNRC18O15417 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.7■■□□□ 1.06
TNRC18O15417 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.7■■□□□ 1.06
TNRC18O15417 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TNRC18O15417 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.7■■□□□ 1.06
TNRC18O15417 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.7■■□□□ 1.06
TNRC18O15417 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.7■■□□□ 1.06
TNRC18O15417 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.69■■□□□ 1.06
TNRC18O15417 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.69■■□□□ 1.06
TNRC18O15417 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNRC18O15417 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TNRC18O15417 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.69■■□□□ 1.06
TNRC18O15417 AC243591.1-201ENST00000452967 1364 ntBASIC21.69■■□□□ 1.06
TNRC18O15417 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TNRC18O15417 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TNRC18O15417 WBP2-203ENST00000433525 928 ntTSL 2 BASIC21.69■■□□□ 1.06
TNRC18O15417 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TNRC18O15417 AL121672.3-201ENST00000608644 468 ntBASIC21.69■■□□□ 1.06
TNRC18O15417 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.69■■□□□ 1.06
TNRC18O15417 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TNRC18O15417 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.69■■□□□ 1.06
TNRC18O15417 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.69■■□□□ 1.06
TNRC18O15417 AC239800.4-201ENST00000603712 296 ntBASIC21.69■■□□□ 1.06
TNRC18O15417 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNRC18O15417 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TNRC18O15417 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNRC18O15417 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.68■■□□□ 1.06
TNRC18O15417 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNRC18O15417 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNRC18O15417 AC011298.2-201ENST00000617989 482 ntBASIC21.68■■□□□ 1.06
TNRC18O15417 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.68■■□□□ 1.06
TNRC18O15417 AC093323.1-202ENST00000635031 2045 ntBASIC21.68■■□□□ 1.06
TNRC18O15417 AC092597.1-201ENST00000487352 616 ntBASIC21.68■■□□□ 1.06
TNRC18O15417 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.68■■□□□ 1.06
TNRC18O15417 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNRC18O15417 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNRC18O15417 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.67■■□□□ 1.06
TNRC18O15417 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.67■■□□□ 1.06
TNRC18O15417 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
TNRC18O15417 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TNRC18O15417 AL773604.1-201ENST00000617417 272 ntBASIC21.67■■□□□ 1.06
TNRC18O15417 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.67■■□□□ 1.06
TNRC18O15417 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNRC18O15417 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNRC18O15417 CALY-203ENST00000368558 825 ntTSL 5 BASIC21.67■■□□□ 1.06
TNRC18O15417 MIR940-201ENST00000401276 94 ntBASIC21.67■■□□□ 1.06
TNRC18O15417 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.67■■□□□ 1.06
TNRC18O15417 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TNRC18O15417 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNRC18O15417 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.66■■□□□ 1.06
TNRC18O15417 AP001005.1-201ENST00000571755 1248 ntBASIC21.66■■□□□ 1.06
TNRC18O15417 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
TNRC18O15417 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNRC18O15417 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNRC18O15417 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNRC18O15417 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.66■■□□□ 1.06
TNRC18O15417 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNRC18O15417 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNRC18O15417 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNRC18O15417 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms