Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
O00370 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
O00370 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
O00370 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.07■□□□□ 0.96
O00370 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
O00370 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
O00370 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.07■□□□□ 0.96
O00370 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
O00370 AC026366.1-201ENST00000488803 879 ntBASIC21.07■□□□□ 0.96
O00370 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.07■□□□□ 0.96
O00370 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.07■□□□□ 0.96
O00370 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.07■□□□□ 0.96
O00370 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.07■□□□□ 0.96
O00370 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
O00370 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.07■□□□□ 0.96
O00370 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
O00370 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
O00370 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
O00370 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
O00370 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
O00370 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
O00370 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
O00370 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.06■□□□□ 0.96
O00370 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
O00370 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.06■□□□□ 0.96
O00370 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
O00370 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
O00370 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
O00370 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
O00370 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
O00370 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
O00370 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
O00370 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
O00370 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
O00370 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
O00370 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
O00370 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
O00370 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
O00370 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
O00370 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
O00370 PHGDH-210ENST00000641115 1638 ntBASIC21.05■□□□□ 0.96
O00370 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
O00370 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
O00370 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.05■□□□□ 0.96
O00370 ESRRAP1-201ENST00000400596 1257 ntBASIC21.05■□□□□ 0.96
O00370 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.05■□□□□ 0.96
O00370 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.05■□□□□ 0.96
O00370 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
O00370 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.05■□□□□ 0.96
O00370 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.05■□□□□ 0.96
O00370 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.05■□□□□ 0.96
O00370 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
O00370 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.05■□□□□ 0.96
O00370 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
O00370 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.05■□□□□ 0.96
O00370 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
O00370 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
O00370 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
O00370 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
O00370 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.05■□□□□ 0.96
O00370 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
O00370 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
O00370 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
O00370 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
O00370 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.04■□□□□ 0.96
O00370 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.04■□□□□ 0.96
O00370 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
O00370 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
O00370 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
O00370 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
O00370 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.04■□□□□ 0.96
O00370 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
O00370 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.04■□□□□ 0.96
O00370 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
O00370 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
O00370 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.04■□□□□ 0.96
O00370 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
O00370 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
O00370 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.04■□□□□ 0.96
O00370 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.04■□□□□ 0.96
O00370 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
O00370 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
O00370 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
O00370 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
O00370 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
O00370 AC116351.2-201ENST00000606540 1585 ntBASIC21.03■□□□□ 0.96
O00370 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
O00370 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
O00370 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
O00370 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
O00370 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
O00370 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.03■□□□□ 0.96
O00370 POM121L13P-201ENST00000422362 380 ntBASIC21.03■□□□□ 0.96
O00370 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.03■□□□□ 0.96
O00370 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
O00370 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
O00370 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
O00370 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
O00370 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
O00370 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms