Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 TSPY5P-201ENST00000426936 936 ntBASIC19.38■□□□□ 0.69
C4orf47A7E2U8 DUSP5P1-201ENST00000441325 1139 ntBASIC19.38■□□□□ 0.69
C4orf47A7E2U8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
C4orf47A7E2U8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 PCED1CP-201ENST00000419887 785 ntBASIC19.37■□□□□ 0.69
C4orf47A7E2U8 YBX1P2-201ENST00000489612 999 ntBASIC19.37■□□□□ 0.69
C4orf47A7E2U8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 SLC25A1P4-201ENST00000567977 778 ntBASIC19.37■□□□□ 0.69
C4orf47A7E2U8 C1QL1P1-201ENST00000568105 661 ntBASIC19.37■□□□□ 0.69
C4orf47A7E2U8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 AC093458.2-201ENST00000623150 629 ntBASIC19.37■□□□□ 0.69
C4orf47A7E2U8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.37■□□□□ 0.69
C4orf47A7E2U8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 AL450487.1-201ENST00000426799 995 ntBASIC19.36■□□□□ 0.69
C4orf47A7E2U8 FAM207BP-201ENST00000447172 505 ntBASIC19.36■□□□□ 0.69
C4orf47A7E2U8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 AL138966.2-201ENST00000621997 464 ntBASIC19.36■□□□□ 0.69
C4orf47A7E2U8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C4orf47A7E2U8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.35■□□□□ 0.69
C4orf47A7E2U8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 MIR2861-201ENST00000636310 90 ntBASIC19.35■□□□□ 0.69
C4orf47A7E2U8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 AC026310.3-201ENST00000625186 2373 ntBASIC19.35■□□□□ 0.69
C4orf47A7E2U8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
C4orf47A7E2U8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C4orf47A7E2U8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.34■□□□□ 0.69
C4orf47A7E2U8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C4orf47A7E2U8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.34■□□□□ 0.69
C4orf47A7E2U8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
C4orf47A7E2U8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.34■□□□□ 0.69
C4orf47A7E2U8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
C4orf47A7E2U8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
C4orf47A7E2U8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C4orf47A7E2U8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.34■□□□□ 0.69
C4orf47A7E2U8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms