Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
A0A1W2PRF3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
A0A1W2PRF3 LINC01006-201ENST00000333319 2292 ntBASIC16.24■□□□□ 0.19
A0A1W2PRF3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
A0A1W2PRF3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
A0A1W2PRF3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.23■□□□□ 0.19
A0A1W2PRF3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 AC239809.2-201ENST00000415381 517 ntBASIC16.23■□□□□ 0.19
A0A1W2PRF3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.23■□□□□ 0.19
A0A1W2PRF3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.23■□□□□ 0.19
A0A1W2PRF3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
A0A1W2PRF3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.23■□□□□ 0.19
A0A1W2PRF3 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.23■□□□□ 0.19
A0A1W2PRF3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
A0A1W2PRF3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.23■□□□□ 0.19
A0A1W2PRF3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.23■□□□□ 0.19
A0A1W2PRF3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
A0A1W2PRF3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.23■□□□□ 0.19
A0A1W2PRF3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
A0A1W2PRF3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
A0A1W2PRF3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.23■□□□□ 0.19
A0A1W2PRF3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 MTDHP1-201ENST00000605323 784 ntBASIC16.22■□□□□ 0.19
A0A1W2PRF3 AL512408.1-201ENST00000569378 2000 ntBASIC16.22■□□□□ 0.19
A0A1W2PRF3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
A0A1W2PRF3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
A0A1W2PRF3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
A0A1W2PRF3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
A0A1W2PRF3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
A0A1W2PRF3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
A0A1W2PRF3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.21■□□□□ 0.19
A0A1W2PRF3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
A0A1W2PRF3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
A0A1W2PRF3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
A0A1W2PRF3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.21■□□□□ 0.19
A0A1W2PRF3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.21■□□□□ 0.19
A0A1W2PRF3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.21■□□□□ 0.19
A0A1W2PRF3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.21■□□□□ 0.19
A0A1W2PRF3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.21■□□□□ 0.19
A0A1W2PRF3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
A0A1W2PRF3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
A0A1W2PRF3 PRKY-204ENST00000533551 1019 ntBASIC16.21■□□□□ 0.19
A0A1W2PRF3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms