Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 AC123595.1-201ENST00000440769 1046 ntBASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 KRT18P20-201ENST00000548986 1279 ntBASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 AP001160.3-201ENST00000601484 763 ntBASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
TRBV25-1A0A075B6N4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 TERF1P2-201ENST00000583350 1212 ntBASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRBV25-1A0A075B6N4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV25-1A0A075B6N4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV25-1A0A075B6N4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV25-1A0A075B6N4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.21□□□□□ -0.14
TRBV25-1A0A075B6N4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
TRBV25-1A0A075B6N4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV25-1A0A075B6N4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRBV25-1A0A075B6N4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRBV25-1A0A075B6N4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV25-1A0A075B6N4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms