Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 AL589863.1-201ENST00000595383 631 ntBASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 AL591135.1-201ENST00000401578 5914 ntBASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 POT1-202ENST00000393329 3950 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HLA-DRB4X5D2U9 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AL121977.1-201ENST00000401636 979 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 SMARCE1P1-201ENST00000417747 1186 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AL590399.2-201ENST00000427536 309 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC064862.5-201ENST00000440618 334 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC079922.1-201ENST00000443291 359 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 OR2L9P-201ENST00000444456 913 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC234771.2-201ENST00000445718 597 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AL022237.1-201ENST00000446663 358 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 COX4I1P2-201ENST00000447446 547 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC099670.1-201ENST00000455141 783 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC004890.1-201ENST00000461005 181 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC093719.1-201ENST00000480427 441 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 GM2AP2-201ENST00000491764 562 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC008055.1-201ENST00000547032 609 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 MIR5010-201ENST00000582846 120 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 WBP1LP11-201ENST00000586141 328 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC005332.4-201ENST00000592752 579 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AL589765.6-201ENST00000601909 549 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC006924.1-201ENST00000610750 559 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC089999.3-201ENST00000622440 577 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 AC007603.3-201ENST00000636915 979 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 OR7E91P-202ENST00000642062 1198 ntBASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HLA-DRB4X5D2U9 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DRB4X5D2U9 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DRB4X5D2U9 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DRB4X5D2U9 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DRB4X5D2U9 GUCY1B2-204ENST00000531898 1979 ntBASIC4.67□□□□□ -1.66
HLA-DRB4X5D2U9 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms