Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RNA5SP453-201ENST00000362503 119 ntBASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 YWHAZP4-201ENST00000392459 708 ntBASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 ARMC4P1-201ENST00000438905 707 ntBASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 COX4I1P2-201ENST00000447446 547 ntBASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AC012368.3-201ENST00000604190 219 ntBASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 MIR6813-201ENST00000621638 56 ntBASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AL122023.1-201ENST00000622847 530 ntBASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AC099654.15-201ENST00000639802 509 ntBASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 AC010325.3-201ENST00000641084 394 ntBASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 OR7E91P-202ENST00000642062 1198 ntBASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TRAPPC4Q9Y296 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 CASC19-246ENST00000641625 1606 ntBASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AC003045.1-201ENST00000398779 713 ntBASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AL139805.1-201ENST00000407837 289 ntBASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 SOCS5P1-201ENST00000440415 949 ntBASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 GTF2IP14-201ENST00000441415 586 ntBASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 RN7SL552P-201ENST00000462094 276 ntBASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AC006924.1-201ENST00000610750 559 ntBASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AC099654.11-201ENST00000638857 294 ntBASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 BIN2P1-201ENST00000504996 1530 ntBASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRAPPC4Q9Y296 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 RN7SKP151-201ENST00000410230 316 ntBASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 OSTCP4-201ENST00000424397 449 ntBASIC5.66□□□□□ -1.5
TRAPPC4Q9Y296 NPM1P25-201ENST00000429734 854 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms