Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RIMS3Q9UJD0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RIMS3Q9UJD0 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
RIMS3Q9UJD0 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
RIMS3Q9UJD0 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RIMS3Q9UJD0 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RIMS3Q9UJD0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 AL158152.1-201ENST00000602652 1435 ntBASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 AL034546.1-201ENST00000623740 3693 ntBASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 AC016583.1-201ENST00000624221 2431 ntBASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 NME1P1-201ENST00000420914 382 ntBASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 AC138761.5-201ENST00000433967 325 ntBASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 RPL5P25-201ENST00000441148 775 ntBASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 MORF4-201ENST00000447135 971 ntBASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 PDCL3P4-201ENST00000489621 720 ntBASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 CHEK2P2-201ENST00000554701 672 ntBASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 DYNLL1P1-201ENST00000595442 269 ntBASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 AL078624.2-201ENST00000605063 554 ntBASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 AL161912.4-201ENST00000623889 2468 ntBASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.74□□□□□ -1.49
RIMS3Q9UJD0 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 AC006509.1-201ENST00000420788 634 ntBASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 ELOBP4-201ENST00000423418 296 ntBASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 RN7SL643P-201ENST00000471845 291 ntBASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 RN7SL413P-201ENST00000482700 297 ntBASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 AC124945.1-201ENST00000485133 188 ntBASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 RPL5P33-201ENST00000487833 905 ntBASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 AC093664.1-201ENST00000511779 289 ntBASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 IGHV4-55-201ENST00000520889 368 ntBASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 AC023080.1-201ENST00000551663 931 ntBASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 AL589743.6-201ENST00000611025 117 ntBASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 AC015712.7-201ENST00000615211 635 ntBASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 ENSA-215ENST00000638926 360 ntTSL 5 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 AC099654.15-201ENST00000639802 509 ntBASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
RIMS3Q9UJD0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms