Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.1□□□□□ -1.43
CHD7Q9P2D1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 SRSF1P1-201ENST00000424058 520 ntBASIC6.1□□□□□ -1.43
CHD7Q9P2D1 RPL7P56-201ENST00000429441 717 ntBASIC6.1□□□□□ -1.43
CHD7Q9P2D1 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 CEACAMP7-201ENST00000444105 496 ntBASIC6.1□□□□□ -1.43
CHD7Q9P2D1 AC063949.1-201ENST00000552900 865 ntBASIC6.1□□□□□ -1.43
CHD7Q9P2D1 AL049872.1-201ENST00000556323 322 ntBASIC6.1□□□□□ -1.43
CHD7Q9P2D1 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 MIR3934-201ENST00000579806 107 ntBASIC6.1□□□□□ -1.43
CHD7Q9P2D1 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 AC002090.1-201ENST00000625000 2138 ntBASIC6.1□□□□□ -1.43
CHD7Q9P2D1 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 AC131971.1-201ENST00000332881 1482 ntBASIC6.1□□□□□ -1.43
CHD7Q9P2D1 COL4A6-203ENST00000394872 6750 ntTSL 5 BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 RPS11P7-201ENST00000442125 465 ntBASIC6.1□□□□□ -1.43
CHD7Q9P2D1 RBM22P12-201ENST00000567098 1255 ntBASIC6.1□□□□□ -1.43
CHD7Q9P2D1 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 AC000068.2-201ENST00000608816 460 ntBASIC6.1□□□□□ -1.43
CHD7Q9P2D1 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 COL11A1-203ENST00000370096 7286 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
CHD7Q9P2D1 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 AC006466.1-201ENST00000438721 289 ntBASIC6.09□□□□□ -1.43
CHD7Q9P2D1 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 AC234771.5-201ENST00000600161 514 ntBASIC6.09□□□□□ -1.43
CHD7Q9P2D1 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 RP1-201ENST00000220676 7100 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 PLD5-208ENST00000536534 8721 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 NUP210L-203ENST00000368559 5889 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 U3.36-201ENST00000408418 213 ntBASIC6.09□□□□□ -1.43
CHD7Q9P2D1 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 AC097721.1-201ENST00000427150 1253 ntBASIC6.09□□□□□ -1.43
CHD7Q9P2D1 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 AL021368.3-201ENST00000607119 578 ntBASIC6.09□□□□□ -1.43
CHD7Q9P2D1 AC012254.5-201ENST00000623573 478 ntBASIC6.09□□□□□ -1.43
CHD7Q9P2D1 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 EGFR-201ENST00000275493 9821 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.09□□□□□ -1.43
CHD7Q9P2D1 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHD7Q9P2D1 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CHD7Q9P2D1 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
CHD7Q9P2D1 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CHD7Q9P2D1 DUTP5-201ENST00000406790 469 ntBASIC6.09□□□□□ -1.44
CHD7Q9P2D1 RPS6P23-201ENST00000413224 722 ntBASIC6.09□□□□□ -1.44
CHD7Q9P2D1 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.09□□□□□ -1.44
CHD7Q9P2D1 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.09□□□□□ -1.44
CHD7Q9P2D1 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.09□□□□□ -1.44
CHD7Q9P2D1 AC087672.1-201ENST00000479876 766 ntBASIC6.09□□□□□ -1.44
CHD7Q9P2D1 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CHD7Q9P2D1 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CHD7Q9P2D1 AC147055.3-201ENST00000510547 851 ntBASIC6.09□□□□□ -1.44
CHD7Q9P2D1 SCARNA6.1-201ENST00000516989 238 ntBASIC6.09□□□□□ -1.44
CHD7Q9P2D1 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.09□□□□□ -1.44
CHD7Q9P2D1 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.09□□□□□ -1.44
CHD7Q9P2D1 AC012616.1-201ENST00000600294 197 ntBASIC6.09□□□□□ -1.44
CHD7Q9P2D1 MAPK10-350ENST00000641777 965 ntBASIC6.09□□□□□ -1.44
CHD7Q9P2D1 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.09□□□□□ -1.44
CHD7Q9P2D1 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
CHD7Q9P2D1 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CHD7Q9P2D1 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHD7Q9P2D1 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.08□□□□□ -1.44
CHD7Q9P2D1 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHD7Q9P2D1 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.08□□□□□ -1.44
CHD7Q9P2D1 PPIP5K1-204ENST00000360301 5565 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
CHD7Q9P2D1 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHD7Q9P2D1 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHD7Q9P2D1 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHD7Q9P2D1 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHD7Q9P2D1 RPL23P2-201ENST00000320371 421 ntBASIC6.08□□□□□ -1.44
CHD7Q9P2D1 RNA5SP319-201ENST00000362768 119 ntBASIC6.08□□□□□ -1.44
CHD7Q9P2D1 AL357752.1-201ENST00000412817 349 ntBASIC6.08□□□□□ -1.44
CHD7Q9P2D1 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms