Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC008638.2-201ENST00000503840 715 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC022483.1-201ENST00000514020 567 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 MTHFD2P4-201ENST00000515074 1025 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 RNU7-179P-201ENST00000516608 68 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC021001.1-201ENST00000518703 987 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 OR5AK1P-201ENST00000524837 922 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 RBMS2P1-201ENST00000525031 1226 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC006065.2-201ENST00000536978 211 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 CRADD-210ENST00000552033 622 ntTSL 3 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 MIR4786-201ENST00000583954 80 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC091834.1-201ENST00000614543 472 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC016999.2-201ENST00000614692 556 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AC241377.1-201ENST00000619797 406 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 LINC00294-201ENST00000631190 3306 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 AL133279.3-201ENST00000563140 2352 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 Z99496.1-201ENST00000469424 1477 ntBASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CUEDC1Q9NWM3 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AC137056.2-201ENST00000624055 1958 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 SLC16A1P1-201ENST00000486743 1510 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 OR10J6P-201ENST00000289731 930 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 RNU1-21P-201ENST00000363327 163 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 RNU6-348P-201ENST00000384386 107 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 HMGB1P10-201ENST00000395823 563 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 SNORD3J-201ENST00000408473 190 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 MTND2P23-201ENST00000422990 651 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 TCEA1P3-201ENST00000443005 880 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AL592437.1-201ENST00000443781 492 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 VN1R10P-201ENST00000447106 875 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 CYCSP42-201ENST00000450823 238 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AC004890.1-201ENST00000461005 181 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 RPL5P13-201ENST00000462840 709 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AC105910.1-201ENST00000482585 483 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 RN7SL65P-201ENST00000485221 315 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AC091982.1-201ENST00000518134 520 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 FAM92A1P1-201ENST00000528023 890 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AC008127.2-201ENST00000549925 1075 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AC034105.2-201ENST00000561866 238 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AL157394.1-201ENST00000562983 1224 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AL158151.4-201ENST00000600965 507 ntBASIC7.8□□□□□ -1.16
CUEDC1Q9NWM3 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms