Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 NPM1P42-201ENST00000560329 862 ntBASIC6.46□□□□□ -1.38
SIX2Q9NPC8 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 AC073333.2-201ENST00000603589 769 ntBASIC6.46□□□□□ -1.38
SIX2Q9NPC8 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 AL357140.4-201ENST00000636827 412 ntBASIC6.46□□□□□ -1.38
SIX2Q9NPC8 MAPK10-350ENST00000641777 965 ntBASIC6.46□□□□□ -1.38
SIX2Q9NPC8 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 AC010168.2-201ENST00000562691 5428 ntBASIC6.46□□□□□ -1.38
SIX2Q9NPC8 THAP12P9-201ENST00000503971 2360 ntBASIC6.46□□□□□ -1.38
SIX2Q9NPC8 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.46□□□□□ -1.38
SIX2Q9NPC8 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 AL162456.1-201ENST00000634535 2006 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 SNX18P3-202ENST00000565670 1750 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 RNU1-134P-201ENST00000362935 165 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 RNA5SP279-201ENST00000365513 117 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 RPL12P12-201ENST00000424633 501 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 AC245884.2-201ENST00000426257 404 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 AC096632.2-201ENST00000438139 1239 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 AC007383.1-201ENST00000445875 636 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 RPL38P3-201ENST00000484463 213 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 AC112484.3-201ENST00000505910 329 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 SUMO2P19-201ENST00000518920 295 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 OR56A7P-201ENST00000524865 941 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 AP003033.2-201ENST00000528901 805 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 MIR744-201ENST00000578242 98 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 SNX18P12-201ENST00000624821 759 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 AC073488.3-201ENST00000631611 778 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 ZNF969P-201ENST00000510345 2341 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 AC007159.1-201ENST00000566529 4706 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 PSG10P-201ENST00000501199 1500 ntBASIC6.45□□□□□ -1.38
SIX2Q9NPC8 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SIX2Q9NPC8 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 RPS7P8-201ENST00000418311 581 ntBASIC6.44□□□□□ -1.38
SIX2Q9NPC8 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 RPL12P16-201ENST00000431098 498 ntBASIC6.44□□□□□ -1.38
SIX2Q9NPC8 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms