Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 MTCYBP39-201ENST00000437562 491 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 RPL29P7-201ENST00000440227 457 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 MTND2P20-201ENST00000440805 661 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 UBE2D3P4-201ENST00000441973 436 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 ZNF736P5Y-201ENST00000451173 805 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 RPL31P3-201ENST00000458430 332 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 PABPC1P10-201ENST00000464731 381 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AC091951.3-201ENST00000504093 246 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 PABPC1P1-201ENST00000506347 591 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 MTCYBP37-201ENST00000510642 1133 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AC027667.1-201ENST00000545814 304 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AC007346.2-201ENST00000564816 892 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 EEF1B2P1-201ENST00000567221 672 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 RN7SL657P-201ENST00000582431 293 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 FXYD6P1-201ENST00000604857 285 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AC023206.1-201ENST00000605824 298 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AC012640.3-201ENST00000607847 430 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AC090246.1-201ENST00000616499 426 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AC096708.4-201ENST00000620563 552 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AL139254.2-202ENST00000641937 1156 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 CASC19-274ENST00000642018 970 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AC011815.2-201ENST00000618230 2021 ntBASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.28□□□□□ -1.4
SEC61A2Q9H9S3 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
SEC61A2Q9H9S3 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 SGO1P1-201ENST00000603525 1447 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AC127070.3-201ENST00000503695 3263 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AC099654.3-201ENST00000447087 1546 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AC074375.1-201ENST00000372993 192 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 RNU6-636P-201ENST00000384598 107 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 MIR431-201ENST00000385266 114 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 RPS3AP5-201ENST00000389400 821 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 RNA5SP35-201ENST00000391257 129 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 RN7SKP117-201ENST00000410175 264 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 RN7SKP85-201ENST00000411349 318 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AL773545.3-201ENST00000414297 706 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AL138479.1-201ENST00000426913 484 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AL390023.1-201ENST00000428836 262 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AC009237.4-201ENST00000441078 238 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AL034399.1-201ENST00000451535 380 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 RPS14P8-201ENST00000478778 369 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 AC131233.1-201ENST00000479200 955 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 RPS3AP43-201ENST00000479743 781 ntBASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.27□□□□□ -1.41
SEC61A2Q9H9S3 RPS10P28-201ENST00000480396 498 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms