Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RNU6-792P-201ENST00000363490 107 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 RNU1-55P-201ENST00000365510 158 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 EEF1GP6-201ENST00000402309 905 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 RNA5SP280-201ENST00000411230 115 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 SSR1P2-201ENST00000415208 787 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 RPL23AP18-201ENST00000416139 468 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 MORF4L1P7-201ENST00000426038 703 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 ETF1P1-206ENST00000427296 984 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 OR7E7P-201ENST00000455678 1012 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC090589.1-201ENST00000473109 362 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 PPP1R2P6-201ENST00000478565 588 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 RN7SL518P-201ENST00000491887 280 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 NPM1P27-201ENST00000502784 830 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 PRELID3BP6-201ENST00000503839 571 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC008868.1-201ENST00000509786 737 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 SNX18P23-201ENST00000510867 677 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 HMGB1P47-201ENST00000511281 589 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 RN7SKP248-201ENST00000516278 305 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 CARSP2-201ENST00000520688 277 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 MTND2P38-201ENST00000522536 667 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC106785.4-201ENST00000569492 412 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AL137246.2-201ENST00000613439 662 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC004801.6-201ENST00000616571 978 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC136428.4-201ENST00000634254 1155 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 SEPT7P7-201ENST00000420492 1301 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 PDCL3P5-201ENST00000398028 722 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AC116036.1-201ENST00000412199 367 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 MTND4LP13-201ENST00000425022 298 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AL022324.2-201ENST00000434827 780 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 MTND2P21-201ENST00000436242 1042 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 ARL5AP3-201ENST00000439327 386 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 snoU109.3-201ENST00000459477 145 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 RN7SL836P-201ENST00000476140 296 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 OR9N1P-202ENST00000494289 481 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 MTCO3P27-201ENST00000514397 196 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 MTCYBP44-201ENST00000514835 823 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AP003355.1-201ENST00000518956 587 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AC104115.2-201ENST00000523026 687 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 UBTFL9-201ENST00000534504 1148 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AC140063.1-201ENST00000541343 259 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AC139697.1-201ENST00000548429 745 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms