Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 RNU6-40P-201ENST00000384254 107 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 MIR187-201ENST00000385062 109 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 NPM1P37-201ENST00000403105 874 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 CYCSP17-201ENST00000407870 315 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 RNU6-584P-201ENST00000410350 95 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 YWHAZP5-201ENST00000419975 730 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 MTCO2P1-201ENST00000424648 477 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 UBE2D3P3-201ENST00000426992 425 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 AC114973.1-201ENST00000429057 632 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 NPM1P25-201ENST00000429734 854 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 AC009518.3-201ENST00000438972 253 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 SULT1D1P-201ENST00000458020 882 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 AC079193.1-201ENST00000460497 588 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 AL135933.1-201ENST00000498657 802 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 TRAV31-201ENST00000502780 342 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 MTCO2P9-201ENST00000503214 694 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 AC083906.1-201ENST00000509298 406 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 CTSLP2-201ENST00000580501 394 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 RPS27AP19-201ENST00000597285 458 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 AC005479.3-201ENST00000602790 431 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 AC005828.7-201ENST00000607331 556 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 AL137246.2-201ENST00000613439 662 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 U1.25-201ENST00000614085 162 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 AL356752.1-201ENST00000615844 593 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 AC005393.1-201ENST00000617916 584 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 U1.34-201ENST00000618578 162 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 U1.31-201ENST00000620022 160 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 SNORA16A-202ENST00000628458 135 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 MIR665-201ENST00000635949 72 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 AC099654.9-201ENST00000637055 678 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 MTCO1P4-201ENST00000520516 1409 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 AC092724.1-201ENST00000624623 3397 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 AC123769.1-201ENST00000530992 3192 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 AC009120.2-204ENST00000621548 2032 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 RN7SKP237-201ENST00000364663 301 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 AC007618.1-201ENST00000366455 732 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 RNU1-56P-201ENST00000391303 164 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 PDCL3P5-201ENST00000398028 722 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 RN7SKP268-201ENST00000411107 316 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 RPS3AP25-201ENST00000411660 793 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 RPS26P38-201ENST00000414476 348 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 AL359885.1-201ENST00000415786 903 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms