Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AC021876.1-201ENST00000425959 359 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 ANXA2P2-201ENST00000435128 1020 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 YWHABP1-201ENST00000445359 727 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AC005410.1-202ENST00000460347 485 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AP002371.1-201ENST00000463604 433 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 RN7SL149P-201ENST00000465197 281 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AP000852.1-201ENST00000472460 573 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 GAPDHP36-201ENST00000480688 918 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 NDUFA5P12-201ENST00000503796 343 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 MTCO3P9-201ENST00000506989 781 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 CHCHD2P7-201ENST00000508008 452 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 PTGES3P3-201ENST00000511479 482 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 RNU6-405P-201ENST00000516637 110 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 MTND6P19-201ENST00000519399 524 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 OR7E161P-201ENST00000533722 967 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AC093283.1-201ENST00000565306 1075 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 MIR3668-201ENST00000582138 75 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 DLEU2_1.1-201ENST00000612089 120 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 DLEU2_1.2-201ENST00000614667 120 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AC026367.3-201ENST00000619032 590 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AC002550.2-201ENST00000621246 394 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 EEF1A1P21-201ENST00000512363 1344 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 LINC02128-205ENST00000641755 1334 ntBASIC8.75□□□□□ -1.01
TRIM47Q96LD4 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC8.75□□□□□ -1.01
TRIM47Q96LD4 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 NACA-216ENST00000550952 2922 ntTSL 2 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AL022163.1-201ENST00000430261 1569 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 Y_RNA.509-201ENST00000384506 99 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 RNU6-83P-201ENST00000384568 112 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AL590002.1-201ENST00000406554 418 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 RN7SKP33-201ENST00000410942 340 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 RPS20P15-201ENST00000412792 311 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 Z97055.1-201ENST00000419730 712 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 HCG25-217ENST00000422366 702 ntTSL 3 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 FBP2P1-202ENST00000424473 530 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 MTCO3P18-201ENST00000440206 761 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC068135.1-201ENST00000446164 246 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AL589880.1-201ENST00000448271 287 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 MRPL35P4-201ENST00000453682 566 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC008379.1-201ENST00000463655 464 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 RN7SL152P-201ENST00000484176 298 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC096661.1-201ENST00000515870 822 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC025881.1-201ENST00000518851 512 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 IGLVIV-59-201ENST00000520218 250 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AP001646.2-201ENST00000528645 1156 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC002400.1-201ENST00000569310 726 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 ROCK1P1-201ENST00000573767 549 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC8.74□□□□□ -1.01
TRIM47Q96LD4 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 IGKV2OR2-7-201ENST00000604652 304 ntBASIC8.74□□□□□ -1.01
TRIM47Q96LD4 AC106791.2-201ENST00000604680 391 ntBASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms