Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 LINC02035-201ENST00000610128 5476 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AC008937.3-201ENST00000606813 1700 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 MED6-212ENST00000615788 1700 ntTSL 5 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 RNU2-16P-201ENST00000410712 136 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 OR51A5P-201ENST00000415429 942 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 FTH1P20-201ENST00000434913 548 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 CHCHD4P5-201ENST00000436684 427 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AL604028.2-201ENST00000437848 788 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AC092393.1-201ENST00000439625 742 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AC073052.1-201ENST00000440417 714 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AL845321.1-201ENST00000444603 348 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AP000936.2-201ENST00000447151 681 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AL356390.1-201ENST00000455684 397 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 ALG13-211ENST00000473389 693 ntTSL 2 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 RN7SL868P-201ENST00000485915 303 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 RN7SL205P-201ENST00000490174 284 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 PFN2-217ENST00000498307 556 ntTSL 4 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 PPM1AP1-201ENST00000502740 1135 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 RNU6-759P-201ENST00000516740 103 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 SCARNA11.1-201ENST00000516918 132 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AC092851.1-201ENST00000535964 478 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 HNRNPA1P74-201ENST00000560782 835 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AC092325.1-201ENST00000566449 554 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 MIR3135A-201ENST00000578460 77 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 MIR3671-201ENST00000580455 88 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 RN7SL32P-201ENST00000580514 281 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AC012065.3-201ENST00000602736 439 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 C8orf59P2-201ENST00000603441 271 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 LSM1P2-201ENST00000604911 322 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AC007349.4-201ENST00000608114 532 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 TUSC7.1-201ENST00000610969 165 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AC111188.2-201ENST00000529697 1387 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 AL353898.3-201ENST00000624679 1755 ntBASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
NEDD1Q8NHV4 SSXP3-201ENST00000442971 1300 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 MAPK10-377ENST00000642006 2752 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 RNU6-1017P-201ENST00000363613 106 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 SNORD51.1-201ENST00000365405 77 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 RNU6-114P-201ENST00000384704 105 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 MIR187-201ENST00000385062 109 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AL355615.1-201ENST00000406187 641 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 OR52N3P-201ENST00000413417 934 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 RPL17P17-201ENST00000419491 557 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 PUDPP2-201ENST00000431423 643 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 MORF4L1P5-201ENST00000433352 961 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AC245452.2-201ENST00000435222 392 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AC009518.3-201ENST00000438972 253 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 DNAJA1P5-201ENST00000440278 943 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 RAB11AP1-201ENST00000442978 646 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 PRDX1P1-201ENST00000449329 596 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AC104978.1-201ENST00000449387 391 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 AC138853.1-201ENST00000503549 823 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 KRT19P6-201ENST00000510983 209 ntBASIC8.29□□□□□ -1.08
NEDD1Q8NHV4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms