Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.88□□□□□ -1.47
CCDC71Q8IV32 AC245884.2-201ENST00000426257 404 ntBASIC5.88□□□□□ -1.47
CCDC71Q8IV32 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 GTF3AP6-201ENST00000432585 986 ntBASIC5.88□□□□□ -1.47
CCDC71Q8IV32 AL020997.1-201ENST00000446554 349 ntBASIC5.88□□□□□ -1.47
CCDC71Q8IV32 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 HSD3BP3-201ENST00000514706 994 ntBASIC5.88□□□□□ -1.47
CCDC71Q8IV32 SNORA74.1-201ENST00000516320 180 ntBASIC5.88□□□□□ -1.47
CCDC71Q8IV32 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 HNRNPCP1-201ENST00000556181 766 ntBASIC5.88□□□□□ -1.47
CCDC71Q8IV32 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 AL135999.3-201ENST00000610501 812 ntBASIC5.88□□□□□ -1.47
CCDC71Q8IV32 AC016590.3-201ENST00000611171 753 ntBASIC5.88□□□□□ -1.47
CCDC71Q8IV32 AC073488.9-201ENST00000631601 754 ntBASIC5.88□□□□□ -1.47
CCDC71Q8IV32 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 NR1H5P-201ENST00000452683 1377 ntBASIC5.88□□□□□ -1.47
CCDC71Q8IV32 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 SHQ1P1-201ENST00000437111 1544 ntBASIC5.88□□□□□ -1.47
CCDC71Q8IV32 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC71Q8IV32 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 RNA5SP350-201ENST00000363298 111 ntBASIC5.87□□□□□ -1.47
CCDC71Q8IV32 RN7SKP240-201ENST00000410583 375 ntBASIC5.87□□□□□ -1.47
CCDC71Q8IV32 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AC021876.1-201ENST00000425959 359 ntBASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AC108479.1-201ENST00000431142 427 ntBASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 VN1R38P-201ENST00000450265 887 ntBASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AC091874.2-201ENST00000505889 720 ntBASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AC091965.3-201ENST00000506236 208 ntBASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 OR5D2P-201ENST00000524390 911 ntBASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AC007066.2-202ENST00000566531 914 ntBASIC5.87□□□□□ -1.47
CCDC71Q8IV32 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 MIR3189-201ENST00000578735 73 ntBASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AC093635.1-201ENST00000609028 555 ntBASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AL031658.2-201ENST00000616850 651 ntBASIC5.87□□□□□ -1.47
CCDC71Q8IV32 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AL132640.3-201ENST00000630473 177 ntBASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AC092692.1-201ENST00000623625 2595 ntBASIC5.87□□□□□ -1.47
CCDC71Q8IV32 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC71Q8IV32 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AC023245.2-201ENST00000530760 2978 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 AC074141.1-201ENST00000588129 2995 ntBASIC5.86□□□□□ -1.47
CCDC71Q8IV32 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC71Q8IV32 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms