Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AC083862.1-201ENST00000427378 1242 ntBASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AC128716.1-201ENST00000475129 166 ntBASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AC022415.1-202ENST00000486612 523 ntBASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AC018645.1-201ENST00000505003 109 ntBASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AP001804.2-201ENST00000533932 910 ntBASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AC015819.1-201ENST00000613588 663 ntBASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AL132640.3-201ENST00000630473 177 ntBASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 LINC02495-203ENST00000636704 242 ntBASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 AC006213.6-201ENST00000623722 4179 ntBASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 RPL31P11-201ENST00000426558 1558 ntBASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 NEK2P2-201ENST00000438441 1338 ntBASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NUP54Q7Z3B4 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AC107021.2-201ENST00000567714 2095 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AC027279.1-201ENST00000568885 4284 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 SMG1P7-201ENST00000565246 2704 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 RN7SKP146-201ENST00000410242 334 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 RN7SKP129-201ENST00000410288 299 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AC125238.2-201ENST00000430003 1440 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 GTF3AP6-201ENST00000432585 986 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 MED28P4-201ENST00000433137 572 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 GTF2IP14-201ENST00000441415 586 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AC234771.2-201ENST00000445718 597 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AC015689.2-201ENST00000528172 1738 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 BTG1P1-201ENST00000540396 508 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 TTC41P-205ENST00000551270 3963 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AL356608.1-201ENST00000610034 820 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AC073575.2-201ENST00000614212 627 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 AC083837.1-201ENST00000565297 2994 ntBASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NUP54Q7Z3B4 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms