Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MIR6726-201ENST00000613751 61 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 TMEM30CP-203ENST00000637814 1035 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 AL121936.2-201ENST00000641935 662 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 MSL3P1-202ENST00000440028 1468 ntBASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
PTCHD4Q6ZW05 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AP000547.3-204ENST00000588548 2523 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC007159.1-201ENST00000566529 4706 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 OR10D1P-201ENST00000355343 936 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 RNU6-584P-201ENST00000410350 95 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 RN7SKP268-201ENST00000411107 316 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 RPS7P12-201ENST00000422385 582 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC114973.1-201ENST00000429057 632 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AL590128.1-201ENST00000433407 286 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC009518.3-201ENST00000438972 253 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 OR7E7P-201ENST00000455678 1012 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 PPP1R11P1-201ENST00000486095 376 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC017007.1-201ENST00000511960 415 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 BCAS2P1-201ENST00000528022 632 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AL121782.1-201ENST00000611242 413 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 MIR6731-201ENST00000614863 72 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC245389.2-201ENST00000616023 576 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC025016.1-201ENST00000616746 682 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC242843.1-201ENST00000618702 573 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC097655.1-201ENST00000635075 318 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AC243725.1-201ENST00000637164 436 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 AL731532.1-201ENST00000623972 4236 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 SNX18P3-202ENST00000565670 1750 ntBASIC6.01□□□□□ -1.45
PTCHD4Q6ZW05 MTCO1P4-201ENST00000520516 1409 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 DNM1P47-203ENST00000571780 12667 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 GTF2IP4-201ENST00000453092 2054 ntBASIC6□□□□□ -1.45
PTCHD4Q6ZW05 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD4Q6ZW05 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms