Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC138907.8-201ENST00000623981 2256 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AL161756.3-201ENST00000641216 2071 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.77□□□□□ -1.48
TMEM53Q6P2H8 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 AF287957.1-201ENST00000607368 1595 ntBASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 RNA5SP140-201ENST00000364524 92 ntBASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 AL359092.1-201ENST00000417156 265 ntBASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 RANP7-201ENST00000418085 644 ntBASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 RPL12P16-201ENST00000431098 498 ntBASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 AC083855.1-201ENST00000440041 258 ntBASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 RN7SL790P-201ENST00000474043 298 ntBASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 RN7SL502P-201ENST00000481857 290 ntBASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 RNU6-1334P-201ENST00000516032 105 ntBASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 AC008429.2-201ENST00000523057 864 ntBASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 BUB1P1-201ENST00000603541 607 ntBASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 AC097467.4-201ENST00000605504 141 ntBASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 CLUHP10-201ENST00000631979 980 ntBASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TMEM53Q6P2H8 PSMC1P6-201ENST00000477233 1319 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 BCORP1-203ENST00000513194 5093 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AC010894.1-201ENST00000313760 361 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 RNU1-5P-201ENST00000362684 144 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 RNA5SP188-201ENST00000362916 129 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 SNORA7A-201ENST00000384765 139 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AC245036.1-201ENST00000391727 309 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AL590635.1-201ENST00000406314 586 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 HMGA1P8-201ENST00000414130 321 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AC003989.1-201ENST00000434569 565 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AC096632.2-201ENST00000438139 1239 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AL390879.1-201ENST00000439143 386 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AL663074.2-201ENST00000440621 479 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 GAPDHP33-201ENST00000443168 1013 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 WDR82P2-201ENST00000444540 928 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 PPIAP32-201ENST00000449940 472 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 RPS3AP49-201ENST00000472161 790 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AL355032.1-201ENST00000472981 438 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 RPS7P11-201ENST00000484240 586 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 SUMO2P4-201ENST00000504193 276 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AC131392.1-201ENST00000506490 633 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AC113191.1-201ENST00000517759 403 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AC068993.1-201ENST00000546724 589 ntBASIC5.76□□□□□ -1.49
TMEM53Q6P2H8 AC005519.1-201ENST00000554490 601 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms