Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SOX5P1-201ENST00000524155 1127 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 OR9L1P-201ENST00000529493 933 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 AC009729.1-201ENST00000548873 1133 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 AC021483.2-201ENST00000567415 758 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 AC068620.3-201ENST00000602749 560 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 AC091046.2-201ENST00000620775 665 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 AC006328.2-201ENST00000623198 397 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 AC012005.2-201ENST00000624333 397 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 HSPD1P7-201ENST00000447985 1686 ntBASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCDC144BQ3MJ40 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 FO082842.1-201ENST00000423552 1370 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 KARSP1-201ENST00000451871 1752 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 VIM2P-201ENST00000402383 1294 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 RPL12P23-201ENST00000405880 490 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 MTCYBP7-201ENST00000419540 1134 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 RPS10P21-201ENST00000430654 475 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 OR6R1P-201ENST00000431838 940 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AL590128.1-201ENST00000433407 286 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 RNFT1P2-201ENST00000443064 757 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC092691.2-201ENST00000461787 803 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC104339.1-201ENST00000465478 348 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 RN7SL216P-201ENST00000471607 298 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 SETP6-201ENST00000479329 568 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 RN7SL170P-201ENST00000487098 295 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 PSMA2P2-201ENST00000504319 686 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC005519.1-201ENST00000554490 601 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 MIR4760-201ENST00000585040 80 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC020914.7-201ENST00000594477 545 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC004241.2-201ENST00000614562 444 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC012676.3-201ENST00000614983 479 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC073862.4-201ENST00000622982 854 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC092159.4-201ENST00000624944 550 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 TMEM30CP-203ENST00000637814 1035 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 METTL8-218ENST00000638989 876 ntTSL 5 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 METTL8-219ENST00000640734 726 ntTSL 2 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 AC073342.2-201ENST00000595842 1800 ntBASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CCDC144BQ3MJ40 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CCDC144BQ3MJ40 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms