Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDS5AQ29RF7 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.34□□□□□ -1.23
PDS5AQ29RF7 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
PDS5AQ29RF7 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.34□□□□□ -1.23
PDS5AQ29RF7 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
PDS5AQ29RF7 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDS5AQ29RF7 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDS5AQ29RF7 AOX3P-204ENST00000491025 2107 ntBASIC7.34□□□□□ -1.23
PDS5AQ29RF7 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.34□□□□□ -1.23
PDS5AQ29RF7 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.34□□□□□ -1.23
PDS5AQ29RF7 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
PDS5AQ29RF7 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.34□□□□□ -1.24
PDS5AQ29RF7 AC027088.4-201ENST00000611559 1947 ntBASIC7.34□□□□□ -1.24
PDS5AQ29RF7 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
PDS5AQ29RF7 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 RNA5SP122-201ENST00000384457 108 ntBASIC7.33□□□□□ -1.24
PDS5AQ29RF7 AC092642.1-201ENST00000392417 425 ntBASIC7.33□□□□□ -1.24
PDS5AQ29RF7 AL354890.1-201ENST00000413730 346 ntBASIC7.33□□□□□ -1.24
PDS5AQ29RF7 PTCD2P2-201ENST00000415579 1095 ntBASIC7.33□□□□□ -1.24
PDS5AQ29RF7 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 AL035660.1-201ENST00000422041 222 ntBASIC7.33□□□□□ -1.24
PDS5AQ29RF7 IPPKP1-201ENST00000422501 768 ntBASIC7.33□□□□□ -1.24
PDS5AQ29RF7 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.33□□□□□ -1.24
PDS5AQ29RF7 BMS1P10-201ENST00000443754 1120 ntBASIC7.33□□□□□ -1.24
PDS5AQ29RF7 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 AC006499.4-201ENST00000510947 694 ntBASIC7.33□□□□□ -1.24
PDS5AQ29RF7 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 IGKV2-4-201ENST00000523070 340 ntBASIC7.33□□□□□ -1.24
PDS5AQ29RF7 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 MIR3614-201ENST00000581261 86 ntBASIC7.33□□□□□ -1.24
PDS5AQ29RF7 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 COX6CP7-201ENST00000597056 208 ntBASIC7.33□□□□□ -1.24
PDS5AQ29RF7 AC137695.1-201ENST00000604126 489 ntBASIC7.33□□□□□ -1.24
PDS5AQ29RF7 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 OR13C1P-202ENST00000641378 2919 ntBASIC7.33□□□□□ -1.24
PDS5AQ29RF7 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PDS5AQ29RF7 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 RNA5SP435-201ENST00000364044 108 ntBASIC7.32□□□□□ -1.24
PDS5AQ29RF7 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 RNA5SP284-201ENST00000384547 118 ntBASIC7.32□□□□□ -1.24
PDS5AQ29RF7 AC016739.1-201ENST00000405359 345 ntBASIC7.32□□□□□ -1.24
PDS5AQ29RF7 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 AC104843.2-201ENST00000427666 297 ntBASIC7.32□□□□□ -1.24
PDS5AQ29RF7 MTND6P12-201ENST00000428247 522 ntBASIC7.32□□□□□ -1.24
PDS5AQ29RF7 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.32□□□□□ -1.24
PDS5AQ29RF7 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 AC073594.1-201ENST00000462065 364 ntBASIC7.32□□□□□ -1.24
PDS5AQ29RF7 AC007998.1-201ENST00000474156 672 ntBASIC7.32□□□□□ -1.24
PDS5AQ29RF7 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 OR56A7P-201ENST00000524865 941 ntBASIC7.32□□□□□ -1.24
PDS5AQ29RF7 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 MIR4776-2-201ENST00000580204 80 ntBASIC7.32□□□□□ -1.24
PDS5AQ29RF7 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 AC011497.2-201ENST00000600255 639 ntBASIC7.32□□□□□ -1.24
PDS5AQ29RF7 AL137246.1-201ENST00000607072 977 ntBASIC7.32□□□□□ -1.24
PDS5AQ29RF7 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.32□□□□□ -1.24
PDS5AQ29RF7 AC011504.1-201ENST00000623331 4103 ntBASIC7.32□□□□□ -1.24
PDS5AQ29RF7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDS5AQ29RF7 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms