Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 AL022319.1-201ENST00000458183 1167 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.53□□□□□ -1.52
H3F3AP84243 AC112484.3-201ENST00000505910 329 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.53□□□□□ -1.52
H3F3AP84243 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.53□□□□□ -1.52
H3F3AP84243 AC018797.1-201ENST00000510791 255 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 AC108103.1-201ENST00000511286 446 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.53□□□□□ -1.52
H3F3AP84243 Y_RNA.710-201ENST00000516975 110 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.53□□□□□ -1.52
H3F3AP84243 NPIPB14P-203ENST00000532298 987 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.53□□□□□ -1.52
H3F3AP84243 AC002519.2-203ENST00000567043 837 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 AC004232.2-201ENST00000574245 821 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.53□□□□□ -1.52
H3F3AP84243 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.53□□□□□ -1.52
H3F3AP84243 AC005899.7-201ENST00000618199 588 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.53□□□□□ -1.52
H3F3AP84243 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
H3F3AP84243 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
H3F3AP84243 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.53□□□□□ -1.52
H3F3AP84243 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
H3F3AP84243 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
H3F3AP84243 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
H3F3AP84243 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
H3F3AP84243 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
H3F3AP84243 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.53□□□□□ -1.52
H3F3AP84243 AC018717.1-201ENST00000457712 1505 ntBASIC5.53□□□□□ -1.52
H3F3AP84243 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
H3F3AP84243 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
H3F3AP84243 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.53□□□□□ -1.52
H3F3AP84243 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3AP84243 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
H3F3AP84243 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
H3F3AP84243 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
H3F3AP84243 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
H3F3AP84243 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.52□□□□□ -1.53
H3F3AP84243 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3AP84243 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
H3F3AP84243 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.52□□□□□ -1.53
H3F3AP84243 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.52□□□□□ -1.53
H3F3AP84243 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.52□□□□□ -1.53
H3F3AP84243 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3AP84243 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.52□□□□□ -1.53
H3F3AP84243 AL139158.1-201ENST00000424719 340 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3AP84243 OR3D1P-201ENST00000438288 955 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.52□□□□□ -1.53
H3F3AP84243 RNA5SP441-201ENST00000516809 88 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 RN7SKP183-201ENST00000517169 324 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.52□□□□□ -1.53
H3F3AP84243 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.52□□□□□ -1.53
H3F3AP84243 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.52□□□□□ -1.53
H3F3AP84243 AC092865.1-201ENST00000544395 1023 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3AP84243 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.52□□□□□ -1.53
H3F3AP84243 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.52□□□□□ -1.53
H3F3AP84243 OR7A8P-201ENST00000595427 913 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 AC008555.7-201ENST00000605008 583 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 AC009779.8-202ENST00000607990 932 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 AC073389.3-201ENST00000609434 935 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 MIR6721-201ENST00000617181 87 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 AL137067.2-201ENST00000621202 131 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.52□□□□□ -1.53
H3F3AP84243 AL357140.4-201ENST00000636827 412 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 AL596275.2-207ENST00000641188 675 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 CASC19-274ENST00000642018 970 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3AP84243 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.52□□□□□ -1.53
H3F3AP84243 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3AP84243 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3AP84243 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.52□□□□□ -1.53
H3F3AP84243 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
H3F3AP84243 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3AP84243 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3F3AP84243 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.52□□□□□ -1.53
H3F3AP84243 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.52□□□□□ -1.53
H3F3AP84243 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.52□□□□□ -1.53
H3F3AP84243 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.51□□□□□ -1.53
H3F3AP84243 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
H3F3AP84243 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.51□□□□□ -1.53
H3F3AP84243 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
H3F3AP84243 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
H3F3AP84243 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.51□□□□□ -1.53
H3F3AP84243 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
H3F3AP84243 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
H3F3AP84243 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
H3F3AP84243 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
H3F3AP84243 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
H3F3AP84243 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
H3F3AP84243 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
H3F3AP84243 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
H3F3AP84243 AC004656.1-201ENST00000568479 4951 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
H3F3AP84243 SNORA21-201ENST00000362423 132 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 RNA5SP110-201ENST00000362638 115 ntBASIC5.51□□□□□ -1.53
H3F3AP84243 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms