Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.24□□□□□ -1.41
CBX1P83916 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CBX1P83916 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CBX1P83916 AL034549.2-201ENST00000618285 3373 ntBASIC6.24□□□□□ -1.41
CBX1P83916 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
CBX1P83916 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.23□□□□□ -1.41
CBX1P83916 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.23□□□□□ -1.41
CBX1P83916 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.23□□□□□ -1.41
CBX1P83916 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CBX1P83916 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CBX1P83916 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.23□□□□□ -1.41
CBX1P83916 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CBX1P83916 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.23□□□□□ -1.41
CBX1P83916 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CBX1P83916 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
CBX1P83916 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC6.23□□□□□ -1.41
CBX1P83916 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC6.23□□□□□ -1.41
CBX1P83916 AC092066.1-201ENST00000425131 317 ntBASIC6.23□□□□□ -1.41
CBX1P83916 AC007790.1-201ENST00000439081 782 ntBASIC6.23□□□□□ -1.41
CBX1P83916 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.23□□□□□ -1.41
CBX1P83916 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CBX1P83916 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.23□□□□□ -1.41
CBX1P83916 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.23□□□□□ -1.41
CBX1P83916 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.23□□□□□ -1.41
CBX1P83916 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.23□□□□□ -1.41
CBX1P83916 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
CBX1P83916 HIGD1AP9-201ENST00000550710 279 ntBASIC6.23□□□□□ -1.41
CBX1P83916 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CBX1P83916 BMS1P16-201ENST00000556075 1147 ntBASIC6.23□□□□□ -1.41
CBX1P83916 DPPA3P2-202ENST00000557188 1219 ntBASIC6.23□□□□□ -1.41
CBX1P83916 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.23□□□□□ -1.41
CBX1P83916 AC026458.1-201ENST00000564330 438 ntBASIC6.23□□□□□ -1.41
CBX1P83916 RNU4ATAC-201ENST00000580972 127 ntBASIC6.23□□□□□ -1.41
CBX1P83916 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.23□□□□□ -1.41
CBX1P83916 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CBX1P83916 NDUFB9P1-201ENST00000604683 510 ntBASIC6.23□□□□□ -1.41
CBX1P83916 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.23□□□□□ -1.41
CBX1P83916 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.23□□□□□ -1.41
CBX1P83916 SAMMSON-227ENST00000642114 1199 ntBASIC6.23□□□□□ -1.41
CBX1P83916 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CBX1P83916 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.23□□□□□ -1.41
CBX1P83916 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CBX1P83916 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CBX1P83916 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CBX1P83916 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.22□□□□□ -1.41
CBX1P83916 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CBX1P83916 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CBX1P83916 AL359091.1-201ENST00000449048 1734 ntBASIC6.22□□□□□ -1.41
CBX1P83916 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.22□□□□□ -1.41
CBX1P83916 OR55B1P-203ENST00000641518 2602 ntBASIC6.22□□□□□ -1.41
CBX1P83916 MAPK10-349ENST00000641767 3661 ntBASIC6.22□□□□□ -1.41
CBX1P83916 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CBX1P83916 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CBX1P83916 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CBX1P83916 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CBX1P83916 RN7SKP279-201ENST00000411383 298 ntBASIC6.22□□□□□ -1.41
CBX1P83916 AC009237.9-201ENST00000414800 347 ntBASIC6.22□□□□□ -1.41
CBX1P83916 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CBX1P83916 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.22□□□□□ -1.41
CBX1P83916 PRPS1P2-201ENST00000430496 937 ntBASIC6.22□□□□□ -1.41
CBX1P83916 SUMO2P8-201ENST00000434672 286 ntBASIC6.22□□□□□ -1.41
CBX1P83916 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.22□□□□□ -1.41
CBX1P83916 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.22□□□□□ -1.41
CBX1P83916 RPL7AP56-201ENST00000476420 791 ntBASIC6.22□□□□□ -1.41
CBX1P83916 AC079080.1-201ENST00000479841 822 ntBASIC6.22□□□□□ -1.41
CBX1P83916 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CBX1P83916 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CBX1P83916 RNA5SP518-201ENST00000515957 119 ntBASIC6.22□□□□□ -1.41
CBX1P83916 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC6.22□□□□□ -1.41
CBX1P83916 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.22□□□□□ -1.41
CBX1P83916 HNRNPCP8-201ENST00000528764 888 ntBASIC6.22□□□□□ -1.41
CBX1P83916 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC6.22□□□□□ -1.41
CBX1P83916 OR4F28P-201ENST00000559128 938 ntBASIC6.22□□□□□ -1.41
CBX1P83916 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC6.22□□□□□ -1.41
CBX1P83916 MIR3936-201ENST00000584304 110 ntBASIC6.22□□□□□ -1.41
CBX1P83916 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC6.22□□□□□ -1.41
CBX1P83916 OR4F8P-201ENST00000589943 937 ntBASIC6.22□□□□□ -1.41
CBX1P83916 MIR6762-201ENST00000613340 86 ntBASIC6.22□□□□□ -1.41
CBX1P83916 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.22□□□□□ -1.41
CBX1P83916 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.22□□□□□ -1.41
CBX1P83916 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.22□□□□□ -1.41
CBX1P83916 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.22□□□□□ -1.41
CBX1P83916 HSPD1P7-201ENST00000447985 1686 ntBASIC6.22□□□□□ -1.41
CBX1P83916 AC090220.1-201ENST00000593078 1699 ntBASIC6.22□□□□□ -1.41
CBX1P83916 SMG1P4-204ENST00000523028 4131 ntBASIC6.22□□□□□ -1.41
CBX1P83916 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CBX1P83916 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.22□□□□□ -1.41
CBX1P83916 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CBX1P83916 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CBX1P83916 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CBX1P83916 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CBX1P83916 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CBX1P83916 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CBX1P83916 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.21□□□□□ -1.41
CBX1P83916 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CBX1P83916 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CBX1P83916 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
CBX1P83916 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.21□□□□□ -1.42
CBX1P83916 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CBX1P83916 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms