Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC013403.1-201ENST00000436954 263 ntBASIC6.78□□□□□ -1.32
TPM4P67936 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.78□□□□□ -1.32
TPM4P67936 RPSAP40-201ENST00000442343 891 ntBASIC6.78□□□□□ -1.32
TPM4P67936 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TPM4P67936 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC6.78□□□□□ -1.32
TPM4P67936 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.78□□□□□ -1.32
TPM4P67936 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.78□□□□□ -1.32
TPM4P67936 RN7SL413P-201ENST00000482700 297 ntBASIC6.78□□□□□ -1.32
TPM4P67936 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.78□□□□□ -1.32
TPM4P67936 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.78□□□□□ -1.32
TPM4P67936 RNU4ATAC-201ENST00000580972 127 ntBASIC6.78□□□□□ -1.32
TPM4P67936 SETP3-201ENST00000581726 813 ntBASIC6.78□□□□□ -1.32
TPM4P67936 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.78□□□□□ -1.32
TPM4P67936 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.78□□□□□ -1.32
TPM4P67936 AC141002.1-201ENST00000607025 279 ntBASIC6.78□□□□□ -1.32
TPM4P67936 RN7SL261P-201ENST00000613441 282 ntBASIC6.78□□□□□ -1.32
TPM4P67936 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
TPM4P67936 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.78□□□□□ -1.32
TPM4P67936 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
TPM4P67936 AC063952.1-203ENST00000634410 658 ntBASIC6.78□□□□□ -1.32
TPM4P67936 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.78□□□□□ -1.32
TPM4P67936 AC005005.4-201ENST00000623789 16698 ntBASIC6.78□□□□□ -1.32
TPM4P67936 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
TPM4P67936 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
TPM4P67936 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
TPM4P67936 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TPM4P67936 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
TPM4P67936 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.32
TPM4P67936 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TPM4P67936 AC009220.2-201ENST00000489759 1751 ntBASIC6.77□□□□□ -1.33
TPM4P67936 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TPM4P67936 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
TPM4P67936 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.77□□□□□ -1.33
TPM4P67936 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TPM4P67936 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TPM4P67936 AC010894.1-201ENST00000313760 361 ntBASIC6.77□□□□□ -1.33
TPM4P67936 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
TPM4P67936 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TPM4P67936 RNA5SP453-201ENST00000362503 119 ntBASIC6.77□□□□□ -1.33
TPM4P67936 RNU1-5P-201ENST00000362684 144 ntBASIC6.77□□□□□ -1.33
TPM4P67936 Y_RNA.209-201ENST00000364156 111 ntBASIC6.77□□□□□ -1.33
TPM4P67936 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TPM4P67936 RN7SKP121-201ENST00000410842 305 ntBASIC6.77□□□□□ -1.33
TPM4P67936 RN7SKP205-201ENST00000410999 307 ntBASIC6.77□□□□□ -1.33
TPM4P67936 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.77□□□□□ -1.33
TPM4P67936 SOCS5P1-201ENST00000440415 949 ntBASIC6.77□□□□□ -1.33
TPM4P67936 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.77□□□□□ -1.33
TPM4P67936 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.77□□□□□ -1.33
TPM4P67936 RPS10P28-201ENST00000480396 498 ntBASIC6.77□□□□□ -1.33
TPM4P67936 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.77□□□□□ -1.33
TPM4P67936 Y_RNA.710-201ENST00000516975 110 ntBASIC6.77□□□□□ -1.33
TPM4P67936 AP001994.1-201ENST00000527539 826 ntBASIC6.77□□□□□ -1.33
TPM4P67936 AP001858.2-201ENST00000536213 601 ntBASIC6.77□□□□□ -1.33
TPM4P67936 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.77□□□□□ -1.33
TPM4P67936 AC089984.3-201ENST00000552838 363 ntBASIC6.77□□□□□ -1.33
TPM4P67936 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.77□□□□□ -1.33
TPM4P67936 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.77□□□□□ -1.33
TPM4P67936 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.77□□□□□ -1.33
TPM4P67936 MIR6731-201ENST00000614863 72 ntBASIC6.77□□□□□ -1.33
TPM4P67936 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.77□□□□□ -1.33
TPM4P67936 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.77□□□□□ -1.33
TPM4P67936 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TPM4P67936 AC005224.3-201ENST00000584683 2140 ntBASIC6.77□□□□□ -1.33
TPM4P67936 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.77□□□□□ -1.33
TPM4P67936 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.77□□□□□ -1.33
TPM4P67936 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.77□□□□□ -1.33
TPM4P67936 AC024587.1-201ENST00000505925 2157 ntBASIC6.76□□□□□ -1.33
TPM4P67936 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.76□□□□□ -1.33
TPM4P67936 CAP1P2-201ENST00000417455 1409 ntBASIC6.76□□□□□ -1.33
TPM4P67936 AL158152.1-201ENST00000602652 1435 ntBASIC6.76□□□□□ -1.33
TPM4P67936 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.76□□□□□ -1.33
TPM4P67936 AC004023.1-201ENST00000561473 1744 ntBASIC6.76□□□□□ -1.33
TPM4P67936 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TPM4P67936 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TPM4P67936 RNA5SP308-201ENST00000362532 115 ntBASIC6.76□□□□□ -1.33
TPM4P67936 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM4P67936 MYL6P5-201ENST00000412707 459 ntBASIC6.76□□□□□ -1.33
TPM4P67936 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM4P67936 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.76□□□□□ -1.33
TPM4P67936 GTF2IP14-201ENST00000441415 586 ntBASIC6.76□□□□□ -1.33
TPM4P67936 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.76□□□□□ -1.33
TPM4P67936 AL356133.1-201ENST00000444762 372 ntBASIC6.76□□□□□ -1.33
TPM4P67936 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.76□□□□□ -1.33
TPM4P67936 RN7SL372P-201ENST00000461982 298 ntBASIC6.76□□□□□ -1.33
TPM4P67936 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC6.76□□□□□ -1.33
TPM4P67936 KHDC1P1-201ENST00000511053 508 ntBASIC6.76□□□□□ -1.33
TPM4P67936 MINOS1P4-201ENST00000515470 318 ntBASIC6.76□□□□□ -1.33
TPM4P67936 RN7SKP288-201ENST00000516227 268 ntBASIC6.76□□□□□ -1.33
TPM4P67936 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.76□□□□□ -1.33
TPM4P67936 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TPM4P67936 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.76□□□□□ -1.33
TPM4P67936 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM4P67936 AC060780.2-201ENST00000589047 198 ntBASIC6.76□□□□□ -1.33
TPM4P67936 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.76□□□□□ -1.33
TPM4P67936 AC004839.1-201ENST00000610269 501 ntBASIC6.76□□□□□ -1.33
TPM4P67936 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.76□□□□□ -1.33
TPM4P67936 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.76□□□□□ -1.33
TPM4P67936 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
TPM4P67936 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM4P67936 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms