Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDC42P60953 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.54□□□□□ -1.52
CDC42P60953 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDC42P60953 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.54□□□□□ -1.52
CDC42P60953 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CDC42P60953 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDC42P60953 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
CDC42P60953 GVINP1-202ENST00000531871 7271 ntBASIC5.54□□□□□ -1.52
CDC42P60953 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CDC42P60953 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDC42P60953 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDC42P60953 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDC42P60953 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.54□□□□□ -1.52
CDC42P60953 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDC42P60953 THAP12P9-201ENST00000503971 2360 ntBASIC5.54□□□□□ -1.52
CDC42P60953 AL442128.2-201ENST00000620246 1824 ntBASIC5.54□□□□□ -1.52
CDC42P60953 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDC42P60953 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDC42P60953 U3.10-201ENST00000364459 214 ntBASIC5.54□□□□□ -1.52
CDC42P60953 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.54□□□□□ -1.52
CDC42P60953 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDC42P60953 VIM2P-201ENST00000402383 1294 ntBASIC5.54□□□□□ -1.52
CDC42P60953 MRPL32P1-201ENST00000406301 247 ntBASIC5.54□□□□□ -1.52
CDC42P60953 RN7SKP221-201ENST00000410420 301 ntBASIC5.54□□□□□ -1.52
CDC42P60953 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.54□□□□□ -1.52
CDC42P60953 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.54□□□□□ -1.52
CDC42P60953 METTL15P3-201ENST00000415522 1221 ntBASIC5.54□□□□□ -1.52
CDC42P60953 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.54□□□□□ -1.52
CDC42P60953 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.54□□□□□ -1.52
CDC42P60953 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.54□□□□□ -1.52
CDC42P60953 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDC42P60953 RBMY2EP-202ENST00000456360 940 ntBASIC5.54□□□□□ -1.52
CDC42P60953 AL133480.2-201ENST00000456723 487 ntBASIC5.54□□□□□ -1.52
CDC42P60953 AC108751.3-201ENST00000461814 1020 ntBASIC5.54□□□□□ -1.52
CDC42P60953 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.54□□□□□ -1.52
CDC42P60953 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.54□□□□□ -1.52
CDC42P60953 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.54□□□□□ -1.52
CDC42P60953 OR8Q1P-201ENST00000526467 655 ntBASIC5.54□□□□□ -1.52
CDC42P60953 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.54□□□□□ -1.52
CDC42P60953 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.54□□□□□ -1.52
CDC42P60953 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.54□□□□□ -1.52
CDC42P60953 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.54□□□□□ -1.52
CDC42P60953 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.54□□□□□ -1.52
CDC42P60953 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.54□□□□□ -1.52
CDC42P60953 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.54□□□□□ -1.52
CDC42P60953 AL512430.4-201ENST00000603085 613 ntBASIC5.54□□□□□ -1.52
CDC42P60953 RN7SL261P-201ENST00000613441 282 ntBASIC5.54□□□□□ -1.52
CDC42P60953 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.54□□□□□ -1.52
CDC42P60953 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.54□□□□□ -1.52
CDC42P60953 RNA5SP439-201ENST00000617595 124 ntBASIC5.54□□□□□ -1.52
CDC42P60953 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC5.54□□□□□ -1.52
CDC42P60953 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
CDC42P60953 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CDC42P60953 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CDC42P60953 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDC42P60953 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.54□□□□□ -1.52
CDC42P60953 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDC42P60953 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDC42P60953 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.54□□□□□ -1.52
CDC42P60953 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDC42P60953 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDC42P60953 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDC42P60953 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.53□□□□□ -1.52
CDC42P60953 AC092451.3-201ENST00000625067 1343 ntBASIC5.53□□□□□ -1.52
CDC42P60953 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.53□□□□□ -1.52
CDC42P60953 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDC42P60953 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDC42P60953 AC024651.2-201ENST00000562480 2098 ntBASIC5.53□□□□□ -1.52
CDC42P60953 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.53□□□□□ -1.52
CDC42P60953 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CDC42P60953 RPL12P23-201ENST00000405880 490 ntBASIC5.53□□□□□ -1.52
CDC42P60953 AC245096.1-201ENST00000413104 546 ntBASIC5.53□□□□□ -1.52
CDC42P60953 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.53□□□□□ -1.52
CDC42P60953 PPIAP10-201ENST00000438675 458 ntBASIC5.53□□□□□ -1.52
CDC42P60953 COL11A2P1-205ENST00000441798 676 ntBASIC5.53□□□□□ -1.52
CDC42P60953 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.53□□□□□ -1.52
CDC42P60953 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDC42P60953 RN7SL70P-201ENST00000478322 302 ntBASIC5.53□□□□□ -1.52
CDC42P60953 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC5.53□□□□□ -1.52
CDC42P60953 AC018645.1-201ENST00000505003 109 ntBASIC5.53□□□□□ -1.52
CDC42P60953 SNX18P24-201ENST00000505249 671 ntBASIC5.53□□□□□ -1.52
CDC42P60953 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.53□□□□□ -1.52
CDC42P60953 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.53□□□□□ -1.52
CDC42P60953 AC093816.1-201ENST00000515076 913 ntBASIC5.53□□□□□ -1.52
CDC42P60953 AC096661.1-201ENST00000515870 822 ntBASIC5.53□□□□□ -1.52
CDC42P60953 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.53□□□□□ -1.52
CDC42P60953 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.53□□□□□ -1.52
CDC42P60953 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.53□□□□□ -1.52
CDC42P60953 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.53□□□□□ -1.52
CDC42P60953 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.53□□□□□ -1.52
CDC42P60953 RN7SL475P-201ENST00000583379 298 ntBASIC5.53□□□□□ -1.52
CDC42P60953 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.53□□□□□ -1.52
CDC42P60953 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.53□□□□□ -1.52
CDC42P60953 AC006115.2-201ENST00000596823 202 ntBASIC5.53□□□□□ -1.52
CDC42P60953 AL078624.2-201ENST00000605063 554 ntBASIC5.53□□□□□ -1.52
CDC42P60953 AC010998.3-201ENST00000613871 631 ntBASIC5.53□□□□□ -1.52
CDC42P60953 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.53□□□□□ -1.52
CDC42P60953 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.53□□□□□ -1.52
CDC42P60953 AC099654.15-201ENST00000639802 509 ntBASIC5.53□□□□□ -1.52
CDC42P60953 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms