Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC097359.1-201ENST00000447946 463 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 AC089999.1-201ENST00000460336 374 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 SLC25A51P1-201ENST00000468432 871 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 SEPT7P6-201ENST00000469999 1143 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.82□□□□□ -1.48
CLDN20P56880 AL117692.1-201ENST00000494283 713 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 RN7SL104P-201ENST00000498686 293 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.82□□□□□ -1.48
CLDN20P56880 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.82□□□□□ -1.48
CLDN20P56880 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.82□□□□□ -1.48
CLDN20P56880 AC011270.1-201ENST00000558606 583 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.82□□□□□ -1.48
CLDN20P56880 MT1CP-201ENST00000567054 174 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.82□□□□□ -1.48
CLDN20P56880 AC022387.2-201ENST00000604050 448 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 KATNBL1P1-201ENST00000605192 748 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.82□□□□□ -1.48
CLDN20P56880 AC096586.2-201ENST00000610260 441 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 MIR6780B-201ENST00000610307 79 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 AC073592.7-201ENST00000623659 507 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 AL139254.3-201ENST00000641097 674 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CLDN20P56880 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN20P56880 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
CLDN20P56880 AC005332.9-201ENST00000620266 2921 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN20P56880 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN20P56880 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN20P56880 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN20P56880 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN20P56880 AL592429.1-201ENST00000403909 1473 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN20P56880 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN20P56880 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.82□□□□□ -1.48
CLDN20P56880 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN20P56880 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CLDN20P56880 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CLDN20P56880 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CLDN20P56880 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CLDN20P56880 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN20P56880 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN20P56880 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.81□□□□□ -1.48
CLDN20P56880 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.81□□□□□ -1.48
CLDN20P56880 NEK2P2-201ENST00000438441 1338 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN20P56880 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN20P56880 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN20P56880 WDR95P-201ENST00000425638 1542 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN20P56880 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN20P56880 RNU11-201ENST00000387069 134 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 AL391419.1-201ENST00000398901 1275 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.81□□□□□ -1.48
CLDN20P56880 THEM7P-201ENST00000419556 672 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 MTND2P11-201ENST00000423638 648 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 MED28P4-201ENST00000433137 572 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN20P56880 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN20P56880 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.81□□□□□ -1.48
CLDN20P56880 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN20P56880 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CLDN20P56880 AC090589.1-201ENST00000473109 362 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.81□□□□□ -1.48
CLDN20P56880 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.81□□□□□ -1.48
CLDN20P56880 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN20P56880 AC106822.1-201ENST00000502647 526 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 RNA5SP418-201ENST00000515951 117 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.81□□□□□ -1.48
CLDN20P56880 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.81□□□□□ -1.48
CLDN20P56880 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.81□□□□□ -1.48
CLDN20P56880 AC023968.1-201ENST00000560719 475 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.81□□□□□ -1.48
CLDN20P56880 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.81□□□□□ -1.48
CLDN20P56880 AC020915.5-201ENST00000596836 964 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 AL360012.1-201ENST00000602813 131 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 AC073046.2-201ENST00000604756 527 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.81□□□□□ -1.48
CLDN20P56880 AL023583.1-201ENST00000607518 1143 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 AC117490.2-201ENST00000610042 594 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 AC010998.3-201ENST00000613871 631 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 uc_338.29-201ENST00000615099 168 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 AL122023.1-201ENST00000622847 530 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 AC103798.2-201ENST00000624292 632 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.81□□□□□ -1.48
CLDN20P56880 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN20P56880 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN20P56880 THAP12P8-201ENST00000447914 2115 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 AC010329.1-201ENST00000593903 8328 ntBASIC5.81□□□□□ -1.48
CLDN20P56880 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLDN20P56880 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN20P56880 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN20P56880 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.8□□□□□ -1.48
CLDN20P56880 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN20P56880 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN20P56880 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN20P56880 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN20P56880 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN20P56880 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN20P56880 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLDN20P56880 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms