Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC022106.1-201ENST00000612834 766 ntBASIC5.59□□□□□ -1.51
CLDN18P56856 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN18P56856 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN18P56856 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
CLDN18P56856 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN18P56856 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CLDN18P56856 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN18P56856 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN18P56856 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN18P56856 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN18P56856 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.59□□□□□ -1.52
CLDN18P56856 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.52
CLDN18P56856 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.59□□□□□ -1.52
CLDN18P56856 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN18P56856 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN18P56856 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN18P56856 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN18P56856 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CLDN18P56856 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN18P56856 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN18P56856 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN18P56856 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN18P56856 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN18P56856 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
CLDN18P56856 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN18P56856 SNORA51.9-201ENST00000384295 124 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 MIR433-201ENST00000384837 93 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN18P56856 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 SETP9-201ENST00000423837 832 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 AC130360.1-201ENST00000425489 1117 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN18P56856 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN18P56856 AMYP1-201ENST00000440059 1023 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 AC016908.1-201ENST00000442571 1219 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 RPL5P10-201ENST00000445207 894 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN18P56856 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN18P56856 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.58□□□□□ -1.52
CLDN18P56856 Y_RNA.710-201ENST00000516975 110 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 IGKV3D-25-201ENST00000519599 235 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.58□□□□□ -1.52
CLDN18P56856 AC130365.2-201ENST00000525882 1201 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.58□□□□□ -1.52
CLDN18P56856 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN18P56856 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN18P56856 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN18P56856 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN18P56856 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN18P56856 AC007346.1-201ENST00000569208 867 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 AC027229.1-201ENST00000583887 253 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN18P56856 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN18P56856 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN18P56856 AC025262.3-201ENST00000623666 360 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN18P56856 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN18P56856 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN18P56856 AC024651.2-201ENST00000562480 2098 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN18P56856 HSPD1P9-201ENST00000420325 1636 ntBASIC5.58□□□□□ -1.52
CLDN18P56856 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN18P56856 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN18P56856 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CLDN18P56856 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CLDN18P56856 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CLDN18P56856 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN18P56856 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN18P56856 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN18P56856 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN18P56856 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN18P56856 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN18P56856 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN18P56856 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN18P56856 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN18P56856 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.57□□□□□ -1.52
CLDN18P56856 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN18P56856 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN18P56856 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN18P56856 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.57□□□□□ -1.52
CLDN18P56856 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN18P56856 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CLDN18P56856 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLDN18P56856 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN18P56856 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
CLDN18P56856 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLDN18P56856 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN18P56856 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN18P56856 COX6B1P3-201ENST00000312310 260 ntBASIC5.57□□□□□ -1.52
CLDN18P56856 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CLDN18P56856 SNORA21-201ENST00000362423 132 ntBASIC5.57□□□□□ -1.52
CLDN18P56856 SNORA43.1-201ENST00000364863 140 ntBASIC5.57□□□□□ -1.52
CLDN18P56856 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.57□□□□□ -1.52
CLDN18P56856 RNU11-6P-201ENST00000391127 133 ntBASIC5.57□□□□□ -1.52
CLDN18P56856 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CLDN18P56856 SNORA77.2-201ENST00000408571 112 ntBASIC5.57□□□□□ -1.52
CLDN18P56856 RN7SKP240-201ENST00000410583 375 ntBASIC5.57□□□□□ -1.52
CLDN18P56856 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.57□□□□□ -1.52
CLDN18P56856 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms