Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.62□□□□□ -1.35
HDAC4P56524 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.62□□□□□ -1.35
HDAC4P56524 AC009120.3-201ENST00000563335 499 ntBASIC6.62□□□□□ -1.35
HDAC4P56524 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.62□□□□□ -1.35
HDAC4P56524 AC107993.1-201ENST00000591343 684 ntBASIC6.62□□□□□ -1.35
HDAC4P56524 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.62□□□□□ -1.35
HDAC4P56524 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.62□□□□□ -1.35
HDAC4P56524 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.62□□□□□ -1.35
HDAC4P56524 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.62□□□□□ -1.35
HDAC4P56524 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.62□□□□□ -1.35
HDAC4P56524 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.62□□□□□ -1.35
HDAC4P56524 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HDAC4P56524 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 AL078595.2-201ENST00000605309 1780 ntBASIC6.62□□□□□ -1.35
HDAC4P56524 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC4P56524 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC4P56524 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.61□□□□□ -1.35
HDAC4P56524 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC4P56524 AL132656.3-201ENST00000606384 1595 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 AC011369.2-201ENST00000624423 1567 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 AL137058.3-201ENST00000624531 3099 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC4P56524 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.61□□□□□ -1.35
HDAC4P56524 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.61□□□□□ -1.35
HDAC4P56524 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.61□□□□□ -1.35
HDAC4P56524 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.61□□□□□ -1.35
HDAC4P56524 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC4P56524 AC011504.1-201ENST00000623331 4103 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC4P56524 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC4P56524 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC4P56524 RNA5SP478-201ENST00000364657 115 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC4P56524 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HDAC4P56524 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.61□□□□□ -1.35
HDAC4P56524 UBE2V1P14-201ENST00000415815 558 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 AL360013.1-201ENST00000419031 858 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.61□□□□□ -1.35
HDAC4P56524 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.61□□□□□ -1.35
HDAC4P56524 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.61□□□□□ -1.35
HDAC4P56524 AL138899.2-201ENST00000439139 499 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 RPL12P11-201ENST00000439970 501 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.61□□□□□ -1.35
HDAC4P56524 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.61□□□□□ -1.35
HDAC4P56524 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.61□□□□□ -1.35
HDAC4P56524 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.61□□□□□ -1.35
HDAC4P56524 RNU7-157P-201ENST00000459600 66 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 RN7SL168P-201ENST00000463821 279 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 RN7SL643P-201ENST00000471845 291 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 SNRPCP3-201ENST00000474888 476 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.61□□□□□ -1.35
HDAC4P56524 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HDAC4P56524 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.61□□□□□ -1.35
HDAC4P56524 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.61□□□□□ -1.35
HDAC4P56524 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.61□□□□□ -1.35
HDAC4P56524 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.61□□□□□ -1.35
HDAC4P56524 IGHV4-55-201ENST00000520889 368 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.61□□□□□ -1.35
HDAC4P56524 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.61□□□□□ -1.35
HDAC4P56524 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.61□□□□□ -1.35
HDAC4P56524 AC005332.4-201ENST00000592752 579 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 AL589863.1-201ENST00000595383 631 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 AL136097.3-201ENST00000611097 505 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 AC015819.1-201ENST00000613588 663 ntBASIC6.61□□□□□ -1.35
HDAC4P56524 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
HDAC4P56524 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HDAC4P56524 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
HDAC4P56524 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HDAC4P56524 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC4P56524 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC4P56524 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.6□□□□□ -1.35
HDAC4P56524 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC4P56524 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.6□□□□□ -1.35
HDAC4P56524 LINC01616-201ENST00000561816 2280 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.6□□□□□ -1.35
HDAC4P56524 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC4P56524 RNA5SP77-201ENST00000365394 120 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 SNORA70.9-201ENST00000384370 135 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC4P56524 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
HDAC4P56524 DPPA2P2-201ENST00000418220 897 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.6□□□□□ -1.35
HDAC4P56524 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.6□□□□□ -1.35
HDAC4P56524 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.6□□□□□ -1.35
HDAC4P56524 AC245291.3-201ENST00000443400 292 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 OR2L9P-201ENST00000444456 913 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 AC234771.2-201ENST00000445718 597 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 RPS18P1-201ENST00000447840 458 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.6□□□□□ -1.35
HDAC4P56524 FCF1P7-201ENST00000451185 558 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 AC004890.1-201ENST00000461005 181 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.6□□□□□ -1.35
HDAC4P56524 AC012123.2-201ENST00000485809 248 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 RN7SL714P-201ENST00000487050 298 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 AL117692.1-201ENST00000494283 713 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.6□□□□□ -1.35
HDAC4P56524 OR52A4P-203ENST00000498233 1014 ntBASIC6.6□□□□□ -1.35
HDAC4P56524 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms