Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RPSAP32-201ENST00000432681 526 ntBASIC5.77□□□□□ -1.49
CDH11P55287 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH11P55287 AC092967.1-201ENST00000449016 481 ntBASIC5.77□□□□□ -1.49
CDH11P55287 FCF1P7-201ENST00000451185 558 ntBASIC5.77□□□□□ -1.49
CDH11P55287 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH11P55287 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH11P55287 AC114728.1-201ENST00000488289 483 ntBASIC5.77□□□□□ -1.49
CDH11P55287 AC131392.1-201ENST00000506490 633 ntBASIC5.77□□□□□ -1.49
CDH11P55287 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH11P55287 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH11P55287 AC106800.3-201ENST00000511389 308 ntBASIC5.77□□□□□ -1.49
CDH11P55287 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.77□□□□□ -1.49
CDH11P55287 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH11P55287 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.77□□□□□ -1.49
CDH11P55287 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.77□□□□□ -1.49
CDH11P55287 MT1CP-201ENST00000567054 174 ntBASIC5.77□□□□□ -1.49
CDH11P55287 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.77□□□□□ -1.49
CDH11P55287 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.77□□□□□ -1.49
CDH11P55287 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH11P55287 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH11P55287 AC012368.3-201ENST00000604190 219 ntBASIC5.77□□□□□ -1.49
CDH11P55287 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH11P55287 AC016911.1-201ENST00000613297 452 ntBASIC5.77□□□□□ -1.49
CDH11P55287 AC073488.9-201ENST00000631601 754 ntBASIC5.77□□□□□ -1.49
CDH11P55287 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.77□□□□□ -1.49
CDH11P55287 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CDH11P55287 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH11P55287 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.77□□□□□ -1.49
CDH11P55287 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.77□□□□□ -1.49
CDH11P55287 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH11P55287 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH11P55287 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH11P55287 SAGE3P-201ENST00000619800 1635 ntBASIC5.77□□□□□ -1.49
CDH11P55287 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH11P55287 AOX3P-204ENST00000491025 2107 ntBASIC5.77□□□□□ -1.49
CDH11P55287 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH11P55287 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH11P55287 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH11P55287 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CDH11P55287 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH11P55287 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
CDH11P55287 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH11P55287 AC093297.3-201ENST00000607056 2517 ntBASIC5.76□□□□□ -1.49
CDH11P55287 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH11P55287 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH11P55287 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH11P55287 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CDH11P55287 OR7A2P-201ENST00000304105 930 ntBASIC5.76□□□□□ -1.49
CDH11P55287 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH11P55287 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CDH11P55287 OR2W4P-201ENST00000406496 926 ntBASIC5.76□□□□□ -1.49
CDH11P55287 RN7SKP129-201ENST00000410288 299 ntBASIC5.76□□□□□ -1.49
CDH11P55287 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH11P55287 AL359885.1-201ENST00000415786 903 ntBASIC5.76□□□□□ -1.49
CDH11P55287 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH11P55287 AL139158.1-201ENST00000424719 340 ntBASIC5.76□□□□□ -1.49
CDH11P55287 GAPDHP33-201ENST00000443168 1013 ntBASIC5.76□□□□□ -1.49
CDH11P55287 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH11P55287 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.76□□□□□ -1.49
CDH11P55287 AL355032.1-201ENST00000472981 438 ntBASIC5.76□□□□□ -1.49
CDH11P55287 RPL5P14-201ENST00000494197 878 ntBASIC5.76□□□□□ -1.49
CDH11P55287 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.76□□□□□ -1.49
CDH11P55287 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH11P55287 AC093870.1-201ENST00000506837 213 ntBASIC5.76□□□□□ -1.49
CDH11P55287 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH11P55287 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.76□□□□□ -1.49
CDH11P55287 SCARNA5-201ENST00000516201 276 ntBASIC5.76□□□□□ -1.49
CDH11P55287 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH11P55287 AC124891.1-201ENST00000536322 519 ntBASIC5.76□□□□□ -1.49
CDH11P55287 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH11P55287 TDGP1-201ENST00000543961 1229 ntBASIC5.76□□□□□ -1.49
CDH11P55287 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH11P55287 AC121758.1-202ENST00000556917 658 ntBASIC5.76□□□□□ -1.49
CDH11P55287 AC093524.1-201ENST00000564266 1094 ntBASIC5.76□□□□□ -1.49
CDH11P55287 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.76□□□□□ -1.49
CDH11P55287 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH11P55287 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH11P55287 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH11P55287 AC021422.1-201ENST00000621212 473 ntBASIC5.76□□□□□ -1.49
CDH11P55287 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH11P55287 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH11P55287 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH11P55287 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH11P55287 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH11P55287 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH11P55287 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH11P55287 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH11P55287 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH11P55287 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH11P55287 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CDH11P55287 AC137056.2-201ENST00000624055 1958 ntBASIC5.75□□□□□ -1.49
CDH11P55287 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH11P55287 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CDH11P55287 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH11P55287 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH11P55287 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CDH11P55287 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CDH11P55287 RN7SKP187-201ENST00000365536 330 ntBASIC5.75□□□□□ -1.49
CDH11P55287 MIR621-201ENST00000384919 96 ntBASIC5.75□□□□□ -1.49
CDH11P55287 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms